Package: RuHere
Title: Flags Spatial Errors in Biological Collection Data Using
        Specialists' Information
Version: 1.1.0
Authors@R: c(
    person("Weverton C. F.", "Trindade", email = "wevertonf1993@gmail.com", role = c("aut", "cre"),
    comment = c(ORCID = "0000-0003-2045-4555")),
    person("Fernanda S.", "Caron", email = "fernandadesouzacaron@gmail.com", role = c("aut"),
    comment = c(ORCID = "0000-0002-1884-6157")))
BugReports: https://github.com/wevertonbio/RuHere/issues
Description: Automatically flags common spatial errors in biological collection data using metadata and specialists' information. RuHere implements a workflow to manage occurrence data through six steps: dataset merging, metadata flagging, validation against expert-derived distribution maps, visualization of flagged records, and sampling bias exploration. It specifically integrates specialist-curated range information to identify geographic errors and introductions that often escape standard automated validation procedures. For details on the methodology, see: Trindade & Caron (2026) <doi:10.64898/2026.02.02.703373>.
Imports: Rcpp, terra, data.table, faunabr (>= 1.1.1), florabr (>=
        1.3.1), jsonlite, rgbif, rredlist, stringi, RPostgreSQL, DBI,
        ridigbio, fields, ggplot2, mapview, sf, ggnewscale, httr
Suggests: pbapply, knitr, R.utils, rmarkdown, CoordinateCleaner
License: GPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.3.3
Depends: R (>= 3.5)
LazyData: true
LinkingTo: Rcpp (>= 1.1.0), RcppArmadillo (>= 15.0.2.2)
VignetteBuilder: knitr
URL: https://wevertonbio.github.io/RuHere/
NeedsCompilation: yes
Packaged: 2026-08-26 16:38:26 UTC; wever
Author: Weverton C. F. Trindade [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2045-4555>),
  Fernanda S. Caron [aut] (ORCID:
    <https://orcid.org/0000-0002-1884-6157>)
Maintainer: Weverton C. F. Trindade <wevertonf1993@gmail.com>
Repository: CRAN
Date/Publication: 2026-08-27 05:10:30 UTC
Built: R 4.5.2; x86_64-apple-darwin20; 2026-08-27 06:26:22 UTC; unix
Archs: RuHere.so.dSYM
