Temporally Explicit Species Distribution Modelling

---

Documentation for package ‘TemporalModelR’ version 0.2.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

analyze_temporal_patterns	Analyze Temporal Patterns in Binary Raster Time Series
analyze_trends_by_spatial_unit	Summarize Temporal Patterns and Trends by Spatial Unit
build_temporal_gam	Build Temporal GAM Models Across Cross-Validation Folds
build_temporal_glm	Build Temporal GLM Models Across Cross-Validation Folds
build_temporal_hv	Build Temporal Hypervolume Models Across Cross-Validation Folds
build_temporal_rf	Build Temporal Random Forest Models Across Cross-Validation Folds
extdata	Bundled rasters, point files, and prediction outputs
generate_absences	Generate Temporally Explicit Pseudoabsence Points
generate_spatiotemporal_predictions	Generate Spatiotemporal Predictions from Temporal Models
plot_model_assessment	Visualize Model Assessment Metrics Across Time
raster_align	Align and Standardize Raster Files to a Reference Raster
scale_rasters	Scale Environmental Rasters Using Species Occurrence Data
spatiotemporal_partition	Spatiotemporal Cross-Validation Partitioning
spatiotemporal_rarefaction	Spatiotemporal Rarefaction of Species Occurrence Data
summarize_raster_outputs	Summarize Prediction Rasters into Consensus Outputs
temporally_explicit_extraction	Extract Time-Aligned Environmental Values at Species Occurrences
tmr_absences	Pre-built pseudoabsence result (seasonal workflow)
tmr_absences_annual	Pre-built pseudoabsence result (annual workflow)
tmr_glm	Pre-built GLM result (seasonal workflow)
tmr_glm_annual	Pre-built GLM result (annual workflow)
tmr_partition	Pre-built spatiotemporal partition (seasonal workflow)
tmr_partition_annual	Pre-built spatiotemporal partition (annual workflow)
tmr_partition_small	Pre-built spatiotemporal partition, small version (seasonal workflow)
tmr_predictions	Pre-built spatiotemporal predictions (seasonal workflow)
tmr_predictions_annual	Pre-built spatiotemporal predictions (annual workflow)