# Representation of Archaeological Data

## Documentation for package ‘arkhe’ version 0.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

A C G H I M O P R S V misc

## -- A --

assert_dimensions | Check Object Attributes
assert_dimnames | Check Object Attributes
assert_empty | Check Object Attributes
assert_filled | Check Object Attributes
assert_infinite | Check Data
assert_length | Check Object Attributes
assert_lengths | Check Object Attributes
assert_matrix | Check Matrix
assert_missing | Check Data
assert_names | Check Object Attributes
assert_numeric | Check Numeric Values
assert_relation | Check Numeric Values
assert_scalar | Check Data Types
assert_trend | Check Numeric Values
assert_type | Check Data Types
assert_unique | Check Data
as_composition | Coerce
as_composition-method | Coerce
as_count | Coerce
as_count-method | Coerce
as_features | Coerce
as_features-method | Coerce
as_incidence | Coerce
as_incidence-method | Coerce
as_long | Coerce
as_long-method | Coerce
as_occurrence | Coerce
as_occurrence-method | Coerce
as_stratigraphy | Coerce
as_stratigraphy-method | Coerce

## -- C --

check-attribute | Check Object Attributes
check-data | Check Data
check-matrix | Check Matrix
check-numeric | Check Numeric Values
check-type | Check Data Types
coerce | Coerce
CompositionMatrix | Relative Frequency Matrix
CompositionMatrix-class | Relative Frequency Matrix
CountMatrix | Absolute Frequency Matrix
CountMatrix-class | Absolute Frequency Matrix

## -- G --

get | Get or Set Parts of an Object
get_dates | Get or Set Parts of an Object
get_dates-method | Get or Set Parts of an Object
get_groups | Get or Set Parts of an Object
get_groups-method | Get or Set Parts of an Object
get_samples | Get or Set Parts of an Object
get_samples-method | Get or Set Parts of an Object
get_taq | Get or Set Parts of an Object
get_taq-method | Get or Set Parts of an Object
get_terminus | Get or Set Parts of an Object
get_terminus-method | Get or Set Parts of an Object
get_totals | Get or Set Parts of an Object
get_totals-method | Get or Set Parts of an Object
get_tpq | Get or Set Parts of an Object
get_tpq-method | Get or Set Parts of an Object

## -- H --

has_dates | Get or Set Parts of an Object
has_dates-method | Get or Set Parts of an Object
has_duplicates | Utility Predicates
has_groups | Get or Set Parts of an Object
has_groups-method | Get or Set Parts of an Object
has_infinite | Utility Predicates
has_length | Utility Predicates
has_missing | Utility Predicates
has_names | Utility Predicates
has_terminus | Get or Set Parts of an Object
has_terminus-method | Get or Set Parts of an Object

## -- I --

IncidenceMatrix | Incidence Matrix
IncidenceMatrix-class | Incidence Matrix
is_atomic | Type Predicates
is_character | Type Predicates
is_constant | Numeric Trend Predicates
is_decreasing | Numeric Trend Predicates
is_double | Type Predicates
is_empty | Utility Predicates
is_error | Type Predicates
is_even | Numeric Predicates
is_greater | Numeric Trend Predicates
is_increasing | Numeric Trend Predicates
is_integer | Type Predicates
is_list | Type Predicates
is_logical | Type Predicates
is_lower | Numeric Trend Predicates
is_message | Type Predicates
is_negative | Numeric Predicates
is_numeric | Type Predicates
is_odd | Numeric Predicates
is_positive | Numeric Predicates
is_scalar_atomic | Scalar Type Predicates
is_scalar_character | Scalar Type Predicates
is_scalar_double | Scalar Type Predicates
is_scalar_integer | Scalar Type Predicates
is_scalar_list | Scalar Type Predicates
is_scalar_logical | Scalar Type Predicates
is_scalar_numeric | Scalar Type Predicates
is_scalar_vector | Scalar Type Predicates
is_square | Matrix Predicates
is_symmetric | Matrix Predicates
is_vector | Type Predicates
is_warning | Type Predicates
is_whole | Numeric Predicates
is_zero | Numeric Predicates

## -- M --

mutators | Get or Set Parts of an Object

## -- O --

OccurrenceMatrix-class | Co-Occurrence Matrix

## -- P --

predicate-matrix | Matrix Predicates
predicate-numeric | Numeric Predicates
predicate-scalar | Scalar Type Predicates
predicate-trend | Numeric Trend Predicates
predicate-type | Type Predicates
predicate-utils | Utility Predicates

## -- R --

remove | Data Cleaning
remove_empty | Data Cleaning
remove_empty-method | Data Cleaning
remove_Inf | Data Cleaning
remove_Inf-method | Data Cleaning
remove_NA | Data Cleaning
remove_NA-method | Data Cleaning
remove_zero | Data Cleaning
remove_zero-method | Data Cleaning
replace | Data Replacement
replace_Inf | Data Replacement
replace_Inf-method | Data Replacement
replace_NA | Data Replacement
replace_NA-method | Data Replacement
replace_zero | Data Replacement
replace_zero-method | Data Replacement

## -- S --

set | Get or Set Parts of an Object
set_dates-method | Get or Set Parts of an Object
set_dates<- | Get or Set Parts of an Object
set_dates<--method | Get or Set Parts of an Object
set_groups-method | Get or Set Parts of an Object
set_groups<- | Get or Set Parts of an Object
set_groups<--method | Get or Set Parts of an Object
set_samples-method | Get or Set Parts of an Object
set_samples<- | Get or Set Parts of an Object
set_samples<--method | Get or Set Parts of an Object
set_taq-method | Get or Set Parts of an Object
set_taq<- | Get or Set Parts of an Object
set_taq<--method | Get or Set Parts of an Object
set_terminus-method | Get or Set Parts of an Object
set_terminus<- | Get or Set Parts of an Object
set_terminus<--method | Get or Set Parts of an Object
set_totals-method | Get or Set Parts of an Object
set_totals<- | Get or Set Parts of an Object
set_totals<--method | Get or Set Parts of an Object
set_tpq-method | Get or Set Parts of an Object
set_tpq<- | Get or Set Parts of an Object
set_tpq<--method | Get or Set Parts of an Object
StratigraphicMatrix-class | Stratigraphic Matrix
subset | Extract or Replace Parts of an Object
summary | Object Summaries
summary-method | Object Summaries

## -- V --

validate | Validate a Condition

## -- misc --

.CompositionMatrix | Relative Frequency Matrix
.CountMatrix | Absolute Frequency Matrix
.IncidenceMatrix | Incidence Matrix
.OccurrenceMatrix | Co-Occurrence Matrix
.StratigraphicMatrix | Stratigraphic Matrix
[-method | Extract or Replace Parts of an Object
[<--method | Extract or Replace Parts of an Object
[[<--method | Extract or Replace Parts of an Object