Package: bdc
Title: Biodiversity Data Cleaning
Version: 1.0.0
Authors@R: c(
    person("Bruno", "Ribeiro", , "ribeiro.brr@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-7755-6715")),
    person("Geiziane", "Tessarolo", , "geites@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0003-1361-0062")),
    person("Santiago", "Velazco", , "sjevelazco@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0002-7527-0967")),
    person("Lucas", "Jardim", , "lucas.ljardim9@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0003-2602-5575")),
    person("Karlo", "Guidoni-Martins", , "kguidonimartins@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0002-8458-8467")),
    person("Rafael", "Loyola", , "rdiasloyola@gmail.com", role = "ctb",
           comment = c(ORCID = "0000-0001-5323-2735")),
    person("Steven", "Bachman", , "S.Bachman@kew.org ", role = "ctb",
           comment = c(ORCID = "0000-0003-1085-6075"))
  )
Description: The bdc package brings together several aspects of
    biodiversity data-cleaning in one place. It is organized in thematic
    modules related to different biodiversity dimensions, including 1)
    Standardization and integration of different datasets; 2) Pre-filter:
    flagging and removal of invalid or non-interpretable information,
    followed by data amendments; 3) Taxonomy: cleaning, parsing, and
    harmonization of scientific names from several taxonomic groups
    against taxonomic databases locally stored through the application of
    exact and partial matching algorithms; 4) Space: flagging of
    erroneous, suspect, and low-precision geographic coordinates; and 5)
    Time: flagging and, whenever possible, correction of inconsistent
    collection date. In addition, the package contains features to
    visualize, document, and report data quality – which is essential for
    making data quality assessment transparent and reproducible.
License: GPL (>= 3)
URL: https://brunobrr.github.io/bdc/ (website)
        https://github.com/brunobrr/bdc
BugReports: https://github.com/brunobrr/bdc/issues
Imports: CoordinateCleaner, dplyr, DT, foreach, fs, ggplot2, here,
        magrittr, purrr, qs, readr, rgnparser, rnaturalearth, sf (>=
        1.0.5), stringdist, stringi, stringr, taxadb (>= 0.1.3),
        tibble, tidyselect
Suggests: contentid (>= 0.0.15), countrycode, covr, cowplot, DBI,
        doParallel, duckdb (>= 0.3.2), knitr, maps, markdown,
        rangeBuilder, rappdirs, raster, remotes, rmarkdown,
        rnaturalearthdata, rvest, sp, testthat (>= 3.0.0), xml2
VignetteBuilder: knitr
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.1.2
NeedsCompilation: no
Packaged: 2022-02-26 10:40:30 UTC; Bruno
Author: Bruno Ribeiro [aut, cre] (<https://orcid.org/0000-0002-7755-6715>),
  Geiziane Tessarolo [aut] (<https://orcid.org/0000-0003-1361-0062>),
  Santiago Velazco [aut] (<https://orcid.org/0000-0002-7527-0967>),
  Lucas Jardim [aut] (<https://orcid.org/0000-0003-2602-5575>),
  Karlo Guidoni-Martins [aut] (<https://orcid.org/0000-0002-8458-8467>),
  Rafael Loyola [ctb] (<https://orcid.org/0000-0001-5323-2735>),
  Steven Bachman [ctb] (<https://orcid.org/0000-0003-1085-6075>)
Maintainer: Bruno Ribeiro <ribeiro.brr@gmail.com>
Repository: CRAN
Date/Publication: 2022-03-01 09:00:03 UTC
Built: R 4.0.5; ; 2022-04-21 13:33:21 UTC; windows
