Package: microeco
Type: Package
Title: Microbial Community Ecology Data Analysis
Version: 0.7.5
Authors@R: c(person("Chi", "Liu", role = c("aut", "cre"), email = "liuchi0426@126.com"),
              person("Felipe", "R. P. Mansoldo", role = "ctb", email = "mansoldo@micro.ufrj.br"),
			  person("Umer Zeeshan", "Ijaz", role = "ctb", email = "Umer.Ijaz@glasgow.ac.uk"),
			  person("Chenhao", "Li", role = "ctb", email = "CLI40@mgh.harvard.edu"),
			  person("Yang", "Cao", role = "ctb", email = "yiluheihei@gmail.com"),
              person("Minjie", "Yao", role = "ctb", email = "yaomj@fafu.edu.cn"),
              person("Xiangzhen", "Li", role = "ctb", email = "lixz@cib.ac.cn")
			  )
Author: Chi Liu [aut, cre],
  Felipe R. P. Mansoldo [ctb],
  Umer Zeeshan Ijaz [ctb],
  Chenhao Li [ctb],
  Yang Cao [ctb],
  Minjie Yao [ctb],
  Xiangzhen Li [ctb]
Maintainer: Chi Liu <liuchi0426@126.com>
Description: A series of statistical and plotting approaches in microbial community ecology based on the R6 class. The classes are designed for data preprocessing, taxa abundance plotting, alpha diversity statistics, beta diversity statistics, differential abundance test, environmental data analysis, null model analysis, network analysis, machine learning and functional analysis.
URL: https://github.com/ChiLiubio/microeco
Depends: R (>= 3.5.0)
Imports: R6, stats, ape, vegan, rlang, data.table, magrittr, dplyr,
        tibble, scales, grid, ggplot2, RColorBrewer, reshape2
Suggests: GUniFrac, MASS, ggpubr, randomForest, ggdendro, ggrepel,
        agricolae, gridExtra, picante, pheatmap, igraph, rgexf, mice
License: GPL-3
LazyData: true
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2022-04-20 14:05:07 UTC; Chi
Repository: CRAN
Date/Publication: 2022-04-20 14:52:34 UTC
RoxygenNote: 7.1.2
Built: R 4.0.5; ; 2022-04-20 16:31:54 UTC; windows
