# Pedigree Models

## Documentation for package ‘pedmod’ version 0.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

biconnected_components | Finds the Biconnected Components
biconnected_components_pedigree | Finds the Biconnected Components
block_cut_tree | Creates a Block-cut Tree Like Object
block_cut_tree_pedigree | Creates a Block-cut Tree Like Object
direct_to_standardized | Transform Between Parameterizations
eval_pedigree_grad | Approximate the Log Marginal Likelihood
eval_pedigree_ll | Approximate the Log Marginal Likelihood
max_balanced_partition | Finds an Approximately Balanced Connected Partition
max_balanced_partition_pedigree | Finds an Approximately Balanced Connected Partition
mvndst | Multivariate Normal Distribution CDF
pedigree_ll_terms | Get a C++ Object for Log Marginal Likelihood Approximations
pedmod_opt | Optimize the Log Marginal Likelihood
pedmod_profile | Computes Profile Likelihood Based Confidence Intervals
pedmod_profile_prop | Computes Profile Likelihood Based Confidence Intervals for the Proportion of Variance
pedmod_sqn | Optimize the Log Marginal Likelihood Using a Stochastic Quasi-Newton Method
pedmod_start | Optimize the Log Marginal Likelihood
standardized_to_direct | Transform Between Parameterizations
unconnected_partition | Finds an Approximately Balanced Partition
unconnected_partition_pedigree | Finds an Approximately Balanced Partition