Package: scPOP
Type: Package
Title: Metrics for Benchmarking scRNA-Seq Batch Correction
Version: 0.1.0
Authors@R: c(person("Vinay", "Swamy", email="swamyvinny@gmail.com", role=c('aut', 'cre')),person("David", "McGaughey", role=c("aut")))
Description: Evaluate batch effect correction algorithms for scRNA-seq using multiple established methods, including the Adjusted Rand Index, 
    Normalized Mutual Information, Local Inverse Simpson Index, and Silhouette Width. Methods for aggregating and weighing multiple metrics 
    together are also included. For further explanation of methods, see Swamy et al. (2021)<doi:10.1101/2021.03.26.437190> .
Maintainer: Vinay Swamy <swamyvinny@gmail.com>
License: GPL-3
Encoding: UTF-8
Imports: Rcpp (>= 1.0.5), Matrix, RANN, cluster
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.1.1
Depends: R (>= 2.10)
NeedsCompilation: yes
Packaged: 2021-08-03 23:22:16 UTC; swamyvs
Author: Vinay Swamy [aut, cre],
  David McGaughey [aut]
Repository: CRAN
Date/Publication: 2021-08-04 15:10:02 UTC
Built: R 4.0.5; x86_64-w64-mingw32; 2022-04-21 06:26:03 UTC; windows
Archs: i386, x64
