# Spectral Clustering-Based Method for Identifying B Cell Clones

## Documentation for package ‘scoper’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

as.data.frame-method | S4 class containing clonal assignments and summary data
ExampleDb | Example database
hierarchicalClones | Hierarchical clustering method for clonal partitioning
identicalClones | Sequence identity method for clonal partitioning
plot-method | S4 class containing clonal assignments and summary data
plotCloneSummary | Plot clonal clustering summary
print-method | S4 class containing clonal assignments and summary data
scoper | The SCOPer package
ScoperClones | S4 class containing clonal assignments and summary data
ScoperClones-class | S4 class containing clonal assignments and summary data
ScoperClones-method | S4 class containing clonal assignments and summary data
spectralClones | Spectral clustering method for clonal partitioning
summary-method | S4 class containing clonal assignments and summary data