Package: tramME
Title: Transformation Models with Mixed Effects
Version: 1.0.0
Date: 2022-04-12
Authors@R: c(person("Balint", "Tamasi", role = c("aut", "cre"),
                    email = "balint.tamasi@uzh.ch", comment = c(ORCID = "0000-0002-2629-7362")),
             person("Torsten", "Hothorn",  role = "ctb",
                    email = "Torsten.Hothorn@R-project.org", comment = c(ORCID = "0000-0001-8301-0471")))
Description: Likelihood-based estimation of mixed-effects transformation models using the Template
  Model Builder ('TMB', Kristensen et al., 2016, <doi:10.18637/jss.v070.i05>). The technical details
  of transformation models are given in Hothorn et al. (2018, <doi:10.1111/sjos.12291>). Likelihood
  contributions of exact, randomly censored (left, right, interval) and truncated observations are
  supported. The random effects are assumed to be normally distributed on the scale of the
  transformation function, the marginal likelihood is evaluated using the Laplace approximation,
  and the gradients are calculated with automatic differentiation (Tamasi and Hothorn, 2021,
  <doi:10.32614/RJ-2021-075>). Penalized smooth shift terms can be defined using 'mgcv'.
Depends: R (>= 3.6.0), tram (>= 0.3.2), mlt (>= 1.1.0)
Imports: alabama, lme4 (>= 1.1.19), Matrix, methods, mgcv (>= 1.8.34),
        nlme, TMB (>= 1.7.15), stats, variables (>= 1.0.2), basefun (>=
        1.0.6), numDeriv, MASS, coneproj
Suggests: multcomp, parallel, survival, knitr, coxme, ordinal,
        ordinalCont, gamm4, gamlss.dist, glmmTMB, xtable
LinkingTo: TMB, RcppEigen
VignetteBuilder: knitr
License: GPL-2
URL: http://ctm.R-forge.R-project.org
Encoding: UTF-8
RoxygenNote: 7.1.1
NeedsCompilation: yes
Packaged: 2022-04-12 07:42:47 UTC; balint
Author: Balint Tamasi [aut, cre] (<https://orcid.org/0000-0002-2629-7362>),
  Torsten Hothorn [ctb] (<https://orcid.org/0000-0001-8301-0471>)
Maintainer: Balint Tamasi <balint.tamasi@uzh.ch>
Repository: CRAN
Date/Publication: 2022-04-12 16:10:02 UTC
Built: R 4.0.5; x86_64-w64-mingw32; 2022-04-21 15:26:56 UTC; windows
Archs: i386, x64
