# Vignettes and other documentation

## Vignettes from package 'TransPhylo'

TransPhylo::TransPhylo |  | Introducing the R package TransPhylo | HTML | source | R code
TransPhylo::infer |  | Inference of transmission tree from a dated phylogeny | HTML | source | R code
TransPhylo::multitree |  | Simultaneous Inference of Multiple Transmission Trees | HTML | source | R code
TransPhylo::simulate |  | Simulation of outbreak data | HTML | source | R code