# Automated Analysis of Multiplex Digital PCR Data

## Documentation for package ‘dPCP’ version 2.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

centers_data | Prediction of clusters centroid position
cmeans_clus | Cluster analysis with fuzzy c-means algorithm
dbscan_combination | Test eps and minPts combinations for DBSCAN analysis
dPCP | Automated analysis of digital PCR data
export_csv | Export dPCP analysis results to a csv file
manual_correction | Manual correction of dPCP cluster analysis
plot.centers_data | Prediction of clusters centroid position
plot.cmeans_clus | Cluster analysis with fuzzy c-means algorithm
plot.dPCP | Automated analysis of digital PCR data
plot.rain_reclus | Identification and clustering of "rain" data
plot.reference_dbscan | Find the empty partitions and single target clusters in the reference sample
rain_reclus | Identification and clustering of "rain" data
read_reference | Read reference files
read_sample | Read sample files
read_sampleTable | Read sample table
reference_dbscan | Find the empty partitions and single target clusters in the reference sample
replicates_quant | Calculation of targets concentration, pooling the sample replicates
report_dPCP | Export dPCP analysis results to a pdf report
target_quant | Calculation of targets concentration.