# Gene Registration from Expression and Time-Courses in R

## Documentation for package ‘greatR’ version 0.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

calculate_between_sample_distance | Calculate distance between sample data before and after registration
get_approximate_stretch | Get approximate stretch factor
get_expression_of_interest | Get expression of interest
get_mean_data | Calculate mean expression values from all expression data with replicates
optimise_registration_params | Optimise registration parameters with Simulated Annealing
plot_heatmap | Visualise distances between samples from different time points
plot_registration_results | Plot gene of interest after registration
scale_and_register_data | Register or synchronize different expression profiles
summary_model_comparison | Summarise registration results