Package: metabolomicsR
Type: Package
Title: Tools for Metabolomics Data
Version: 1.0.0
Date: 2022-04-27
Authors@R: 
    person(given = "Xikun",
           family = "Han",
           role = c("cre", "aut"),
           email = "hanxikun2017@gmail.com")
Maintainer: Xikun Han <hanxikun2017@gmail.com>
URL: https://github.com/XikunHan/metabolomicsR
Description: Tools to preprocess, analyse, and visualize metabolomics data. 
  We included a set of functions for sample and metabolite quality control, 
  outlier detection, missing value imputation, dimensional reduction, normalization, 
  data integration, regression, metabolite annotation, enrichment analysis, 
  and visualization of data and results. The package is designed to be a comprehensive R package 
  that can be easily used by researchers with basic R programming skills. 
  The framework designed here is versatile and is extensible to other various methods.
License: GPL-2
Encoding: UTF-8
Depends: methods, R (>= 4.1)
Imports: ggplot2, data.table, plotROC, utils, stats
Suggests: ggthemes, knitr, rmarkdown, testthat (>= 3.0.0), lme4, nlme,
        broom, reshape2, impute, M3C, FNN, RColorBrewer, readxl,
        survival, future, pbapply, future.apply, progressr, ggrepel,
        here, genuMet, ggstatsplot, cowplot, pROC, BiocStyle, MASS,
        xgboost
RoxygenNote: 7.1.2
biocViews: Software, Metabolomics, MassSpectrometry, Regression,
        Normalization, QualityControl
LazyData: FALSE
VignetteBuilder: knitr
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2022-04-27 15:58:39 UTC; xih628
Author: Xikun Han [cre, aut]
Repository: CRAN
Date/Publication: 2022-04-29 07:40:02 UTC
Built: R 4.1.3; ; 2023-04-17 17:55:59 UTC; windows
