Package: perfectphyloR
Type: Package
Title: Reconstruct Perfect Phylogenies from DNA Sequence Data
Version: 0.2.1
Date: 2021-02-28
Author: Charith Karunarathna and Jinko Graham
Maintainer: Charith Karunarathna <ckarunar@sfu.ca>
Description: Reconstructs perfect phylogeny at a user-given focal point and to depict and test association in a genomic region based on the reconstructed partitions. Charith B Karunarathna and Jinko Graham (2019) <bioRxiv:10.1101/674523>.
Depends: R (>= 3.4.0)
License: GNU General Public License
Imports: ape, phytools, Rcpp (>= 0.12.16)
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.1.1
Suggests: HHG, dendextend, vcfR, R.rsp
VignetteBuilder: R.rsp
NeedsCompilation: yes
Packaged: 2021-03-08 00:26:17 UTC; bhagy
Repository: CRAN
Date/Publication: 2021-03-08 05:30:02 UTC
Built: R 4.1.3; x86_64-w64-mingw32; 2023-04-17 16:56:30 UTC; windows
Archs: i386, x64
