# Statistical Tools for Quantitative Genetic Analyses

## Documentation for package ‘qgg’ version 1.1.1

- DESCRIPTION file.

## Help Pages

acc | Compute prediction accuracy for a quantitative or binary trait
adjStat | LD adjustment of marker summary statistics
gbayes | Bayesian linear regression models
getG | Extract elements from genotype matrix stored on disk
gfilter | Quality control of marker summary statistics
glma | Single marker association analysis using linear models or linear mixed models
gprep | Prepare genotype data for all statistical analyses (initial step)
greml | GREML analysis
grm | Computing the genomic relationship matrix (GRM)
gscore | Genomic scoring based on single marker summary statistics
gsea | Gene set enrichment analysis
gsim | Genomic simulation
gsolve | Solve linear mixed model equations
ldsc | LD score regression
mtadj | Adjust marker effects based on correlated information
qcStat | Quality control of marker summary statistics
qgg | Implements Genomic Feature Linear Mixed Models using Likelihood or Bayesian Methods