Package: smartsnp
Type: Package
Title: Fast Multivariate Analyses of Big Genomic Data
Version: 1.1.0
Date: 2021-03-01
Authors@R: c(
    person("Salvador", family = "Herrando-Perez", email = "salherra@gmail.com",
           role = c("aut"), comment = c(ORCID = "0000-0001-6052-6854")),
    person("Ray", family = "Tobler", email = "tingalingx@gmail.com",
           role = c("ctb"), comment = c(ORCID = "0000-0002-4603-1473")),
    person("Christian", family = "Huber", email = "christian.domitian.huber@gmail.com",
           role = c("ctb", "cre"), comment = c(ORCID = "0000-0002-2267-2604")))
Maintainer: Christian Huber <christian.domitian.huber@gmail.com>
Description: Fast computation of multivariate analyses of small (10s to 100s markers) to big (1000s to 100000s) genotype data. Runs Principal Component Analysis allowing for centering, z-score standardization and scaling for genetic drift, projection of ancient samples to modern genetic space and multivariate tests for differences in group location (Permutation-Based Multivariate Analysis of Variance) and dispersion (Permutation-Based Multivariate Analysis of Dispersion).
Language: en-GB
License: MIT + file LICENSE
Depends: R (>= 3.6.0)
Imports: bootSVD, data.table, foreach, Rfast, RSpectra, vegan, vroom,
        Rcpp
RoxygenNote: 7.1.1
Encoding: UTF-8
LazyData: true
LinkingTo: Rcpp, RcppArmadillo
NeedsCompilation: yes
Packaged: 2021-03-03 12:11:40 UTC; christianhuber
Author: Salvador Herrando-Perez [aut] (<https://orcid.org/0000-0001-6052-6854>),
  Ray Tobler [ctb] (<https://orcid.org/0000-0002-4603-1473>),
  Christian Huber [ctb, cre] (<https://orcid.org/0000-0002-2267-2604>)
Repository: CRAN
Date/Publication: 2021-03-04 09:50:02 UTC
Built: R 4.1.3; x86_64-w64-mingw32; 2023-04-17 17:52:55 UTC; windows
Archs: i386, x64
