# Tools for CM SAF NetCDF Data

## Documentation for package ‘cmsafops’ version 1.3.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

A B C D E F G H L M N R S T W Y Z

cmsafops-package | cmsafops: A package for analyzing and manipulating CM SAF NetCDF formatted data.

## -- A --

acsaf_box_mergetime | Function to combine ACSAF NetCDF files and simultaneously cut a region.
add | Add the fields of two input NetCDF files.
addc | Add a constant to a dataset.
add_grid_info | Add grid info

## -- B --

box_mergetime | Function to combine NetCDF files and simultaneously cut a region (and level).

## -- C --

calc_allDatesNc | Designed for the CM SAF R Toolbox.
calc_overlapping_time | Routine to calculate overlapping time periods in two files.
calc_timestepNc | Designed for the CM SAF R Toolbox.
cat | Concatenate datasets of several NetCDF input files.
change_att | Change attributes of a NetCDF variable.
check.coordinate.system | Designed for the CM SAF R Toolbox.
cmsaf.abs | Determine absolute values
cmsaf.add | Add the fields of two input NetCDF files.
cmsaf.addc | Add a constant to a dataset.
cmsaf.adjust.two.files | Routine to adjust the time dimensions and coordinates in two files.
cmsaf.cat | Concatenate datasets of several NetCDF input files.
cmsaf.detrend | Linear detrending of time series
cmsaf.div | Divide the fields of two input NetCDF files.
cmsaf.divc | Divide data by a constant.
cmsaf.mk.test | Apply Mann-Kendall trend test.
cmsaf.mul | Multiply the fields of two input NetCDF files.
cmsaf.mulc | Multiply data with a constant.
cmsaf.regres | Estimate regression parameter
cmsaf.stats | Calculates the rmse, mae, bias, correlation in grid space of two NetCDF files. Designed for the CM SAF R Toolbox.
cmsaf.stats.station.data | Calculates the rmse, mae, bias, correlation over time of a NetCDF file and a dataframe (station data). Designed for the CM SAF R Toolbox.
cmsaf.sub | Subtract the fields of two input NetCDF files.
cmsaf.sub.rel | Subtract the fields of two input NetCDF files (relative). Designed for the CM SAF R Toolbox.
cmsaf.subc | Subtract a constant from a dataset.
cmsaf.transform.coordinate.system | Transform the coordinate system to -180 to 180 longitude of an infile
cmsafops | cmsafops: A package for analyzing and manipulating CM SAF NetCDF formatted data.

## -- D --

dayavg | Determine daily averages
daymax | Determine daily maxima
daymean | Determine daily means
daymin | Determine daily minima
daypctl | Determine daily percentiles
dayrange | This function determines the diurnal range.
daysd | Determine daily standard deviations
daysum | Determine daily sums
dayvar | Determine daily variances
div | Divide the fields of two input NetCDF files.
divc | Divide data by a constant.
divdpm | Divide by days per month.

## -- E --

extract.level | Extract levels from 4-dimensional NetCDF files.
extract.period | Remove a time period.

## -- F --

fldcor | Determine correlations in grid space.
fldcovar | Determine covariances in grid space.
fldmax | Determine the spatial maximum
fldmean | Determine the spatial mean
fldmin | Determine the spatial minimum.
fldrange | Determine the spatial range
fldsd | Determine the spatial standard deviation
fldsum | Determine the spatial sum

## -- G --

get_basename | Determine the basename of a NetCDF file
get_date_time | Get dates and times from NetCDF type date format.
get_dimensions | Designed for the CM SAF R Toolbox.
get_nc_version | Designed for the CM SAF R Toolbox.
get_processing_time_string | Get processing time string
get_time | Convert time steps to POSIXct.
get_time_info | Designed for the CM SAF R Toolbox.
gridboxmax | Determine maxima of selected grid boxes
gridboxmean | Determine means of selected grid boxes
gridboxmin | Determine minima of selected grid boxes
gridboxrange | Determine ranges of selected grid boxes
gridboxsd | Determine standard deviations of selected grid boxes
gridboxsum | Determine sums of selected grid boxes
gridboxvar | Determine variances of selected grid boxes

## -- H --

hourmean | Determine hourly means
hoursum | Determine hourly sums

## -- L --

levbox_mergetime | Function to combine NetCDF files and simultaneously cut a region and level.

## -- M --

mermean | Determine meridional means
mon.anomaly | Determine monthly anomalies
mon.anomaly.climatology | Designed for the CM SAF R Toolbox.
monavg | Determine monthly averages
mondaymean | Determine mean monthly daily variations
monmax | Determine monthly maxima.
monmean | Determine monthly means
monmin | Determine monthly minima
monpctl | Determine monthly percentiles
monsd | Determine monthly standard deviations
monsum | Determine monthly sums
monvar | Determine monthly variance
mon_num_above | Number of timesteps per month above a threshold.
mon_num_below | Number of timesteps per month below a threshold.
mon_num_equal | Number of timesteps per month equal a threshold.
mul | Multiply the fields of two input NetCDF files.
mulc | Multiply data with a constant.
muldpm | Multiply by days per month.
multimonmean | Determine multi-monthly means
multimonsum | Determine multi-monthly sums

## -- N --

ncinfo | Get information about the content of a NetCDF file.
num_above | Number of timesteps above a threshold.
num_below | Number of timesteps below a threshold.
num_equal | Number of timesteps equal a threshold.

## -- R --

read_file | Designed for the CM SAF R Toolbox.
read_ncvar | Read NetCDF variable.
remap | Grid interpolation.
runmax | Determine running maxima
runmean | Determine running means
runmin | Determine running minima
runrange | Determine running range
runsd | Determine running standard deviation
runsum | Determine running sums

## -- S --

seas.anomaly | Determine seasonal anomalies.
seasmean | Determine seasonal means
seassd | Determine seasonal standard deviations
seassum | Determine seasonal sums
seasvar | Determine seasonal variances
sellonlatbox | Select a region by longitude and latitude.
selmon | Extract a list of months.
selperiod | Extract a list of dates.
selpoint | Extract data at a given point.
selpoint.multi | Extract data at multiple points.
seltime | Extract specific timestep.
selyear | Extract a list of years.
sub | Subtract the fields of two input NetCDF files.
subc | Subtract a constant from a dataset.

## -- T --

timavg | Determine all-time average.
timcor | Determine correlations over time.
timcovar | Determine covariances over time.
timcumsum | Accumulate data of NetCDF file.
timmax | Determine all-time maxima.
timmean | Determine all-time mean.
timmin | Determine all-time minima.
timpctl | Determine percentile over all timesteps.
timsd | Determine all-time standard deviations.
timselmean | Determine time selection means
timselsum | Determine time selection sums
timsum | Determine all-time sum.
trend | Determine linear trends.
trend_advanced | Determine multiple linear trends.

## -- W --

wfldmean | Determine the weighted spatial mean.

## -- Y --

ydaymax | Determine multi-year daily maxima
ydaymean | Determine multi-year daily means.
ydaymin | Determine multi-year daily minima
ydayrange | Determine multi-year daily range
ydaysd | Determine multi-year daily standard deviations
ydaysum | Determine multi-year daily sums
ydrunmean | Determine multi-year daily running means.
ydrunsd | Determine multi-year daily running standard deviations
ydrunsum | Determine multi-year daily running sums
year.anomaly | Determine annual anomalies.
yearmax | Determine annual maxima
yearmean | Determine annual means
yearmin | Determine annual minima
yearrange | Determine annual range
yearsd | Determine annual standard deviation
yearsum | Determine annual sums
yearvar | Determine annual variance
ymonmax | Determine multi-year monthly maxima.
ymonmean | Determine multi-year monthly means.
ymonmin | Determine multi-year monthly minima.
ymonsd | Determine multi-year monthly standard deviations.
ymonsum | Determine multi-year monthly sums.
yseasmax | Determine multi-year seasonal maxima.
yseasmean | Determine multi-year seasonal means.
yseasmin | Determine multi-year seasonal minima.
yseassd | Determine multi-year seasonal standard deviations.

## -- Z --

zonmean | Determine zonal means
zonsum | Determine zonal sums