Package: genekitr
Type: Package
Title: Gene Analysis Toolkit
Version: 1.2.5
Authors@R: 
    c(person(given = "Yunze",
             family = "Liu",
             role = c("aut", "cre"),
             email = "jieandze1314@gmail.com",
             comment = c(ORCID = "0000-0002-7414-8556")))
Maintainer: Yunze Liu <jieandze1314@gmail.com>
URL: https://www.genekitr.fun/
BugReports: https://github.com/GangLiLab/genekitr/issues
Description: An analysis toolkit focused on genes. It mainly includes five
    features (search, convert, analysis, plot, and export).
    The user just needs to input feature id ('entrez', 'symbol', 'ensembl' or
    'uniprot') to retrieve feature information and 'PubMed'<https://pubmed.ncbi.nlm.nih.gov/> records, 
    to convert id types, to easily handle gene enrichment analysis and publication-level figures, 
    to plot group interaction and export results as sheets in one 'excel'
    file to easily share and communicate with others.
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6)
Imports: clusterProfiler, dplyr, europepmc, fst, geneset, ggplot2,
        ggraph, ggvenn, igraph, magrittr, openxlsx, stringr, stringi,
        tidyr, rlang
Suggests: AnnotationDbi, BiocManager, cowplot, ComplexUpset,
        data.table, fuzzyjoin, forcats, fgsea, futile.logger,
        ggplotify, ggsci, ggupset, ggrepel, ggridges, ggnewscale,
        GOplot, GOSemSim, labeling, msigdbr, pheatmap, pracma, tm,
        treemap, RColorBrewer, rappdirs, RCurl, reshape2, rio, rrvgo,
        scales, stats, testthat (>= 3.0.0), tibble, wordcloud, knitr,
        rmarkdown, XML, xml2, httr
RoxygenNote: 7.2.2
NeedsCompilation: no
Packaged: 2023-08-28 00:52:49 UTC; reedliu1
Author: Yunze Liu [aut, cre] (<https://orcid.org/0000-0002-7414-8556>)
Repository: CRAN
Date/Publication: 2023-09-07 08:50:09 UTC
Built: R 4.2.3; ; 2024-04-24 03:18:33 UTC; windows
