Package: myTAI
Type: Package
Title: Evolutionary Transcriptomics
Version: 0.9.3
Date: 2021-02-22
Authors@R: person("Hajk-Georg", "Drost",
                role = c("aut", "cre"),
                email = "hajk-georg.drost@tuebingen.mpg.de",
                comment = c(ORCID = "http://orcid.org/0000-0002-1567-306X"))
Description: Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2017) <doi:10.1093/bioinformatics/btx835>). The aim of this tool is to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest (Drost et al. (2016) <doi:10.1101/051565>).
VignetteBuilder: knitr
NeedsCompilation: yes
License: GPL-3
Depends: R (>= 3.1.1)
Imports: Rcpp (>= 0.12.0), nortest (>= 1.0-2), fitdistrplus (>= 1.0-2),
        parallel (>= 3.1.1), foreach (>= 1.4.2), doParallel (>= 1.0.8),
        dplyr (>= 0.3.0), RColorBrewer (>= 1.1-2), taxize (>= 0.6.0),
        methods (>= 3.1.1), graphics (>= 3.1.1), stats (>= 3.1.1),
        grDevices (>= 3.1.1), utils (>= 3.1.1), reshape2 (>= 1.4.1),
        ggplot2 (>= 1.0.1), readr (>= 0.2.2), tibble, scales,
        gridExtra, edgeR
Suggests: knitr (>= 1.6), rmarkdown (>= 0.3.3), devtools (>= 1.6.1),
        testthat (>= 0.9.1), mgcv
LinkingTo: Rcpp, RcppArmadillo, cpp11
URL: https://github.com/drostlab/myTAI
BugReports: https://github.com/drostlab/myTAI/issues
RoxygenNote: 7.1.1
SystemRequirements: C++11
Packaged: 2021-02-23 22:49:22 UTC; hdrost
Author: Hajk-Georg Drost [aut, cre] (<https://orcid.org/0000-0002-1567-306X>)
Maintainer: Hajk-Georg Drost <hajk-georg.drost@tuebingen.mpg.de>
Repository: CRAN
Date/Publication: 2021-02-24 05:40:02 UTC
Built: R 4.2.3; x86_64-w64-mingw32; 2024-04-24 03:41:05 UTC; windows
ExperimentalWindowsRuntime: ucrt
Archs: x64
