Direct Parametric Inference for the Cumulative Incidence Function in Competing Risks

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Documentation for package ‘cmpp’ version 0.0.2

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cmpp-package Direct Parametric Inference for the Cumulative Incidence Function in Competing Risks
bootstrap_variance Estimate Variance of Parameters Using Bootstrap Method
cdf_gomp Compute the CDF of the Gompertz Distribution
CIF_Figs Plot Cumulative Incidence Functions (CIF) with Confidence Intervals
CIF_res1 Compute Cumulative Incidence Function (CIF) Results
Cleanup Clean up memory by deleting the pointer to the Cmpp instance
cmpp Direct Parametric Inference for the Cumulative Incidence Function in Competing Risks
Cmpp_CIF Compute and Plot Cumulative Incidence Functions (CIF) for Competing Risks
compute_grad Compute the Numerical Gradient of the Log-Likelihood
compute_hessian Compute the Hessian Matrix of the Log-Likelihood
compute_log_f_gradient_rcpp Compute the Gradient of the Log-Likelihood Function Generalized odds rate (GOR)
compute_log_f_gradient_rcpp2 Compute the Gradient of the Log-Likelihood Function Proportional Odds Model (POM)
compute_log_f_gradient_rcpp3 Compute the Gradient of the Log-Likelihood Function Proportional Hazards Model (PHM)
compute_log_f_hessian_rcpp Compute the Hessian Matrix of the Log-Likelihood Function Generalized odds rate (GOR)
estimate_parameters Estimate Model Parameters Using Optimization
estimate_parameters_GOR Estimate Parameters for the Generalized odds rate (GOR)
estimate_parameters_PHM Estimate Parameters for the Proportional Hazards Model (PHM)
estimate_parameters_POM Estimate Parameters for the Proportional Odds Model (POM)
fertility_data Fertility History of Rural Women in Shiraz
FineGray_Model Fine-Gray Model for Competing Risks Data
F_cdf_rcpp Compute the CDF of the Parametric Generalized odds rate (GOR)
F_cdf_rcpp2 Compute the CDF of the Parametric Proportional Odds Model (POM)
F_cdf_rcpp3 Compute the CDF of the Parametric Proportional Hazards Model (PHM)
f_pdf_rcpp Compute the PDF of the Parametric Generalized odds rate (GOR)
f_pdf_rcpp2 Compute the PDF of the Parametric Proportional Odds Model (POM)
f_pdf_rcpp3 Compute the PDF of the Parametric Proportional Hazards Model (PHM)
GetData Retrieve Initialized Data from the Cmpp Model
GetDim Get Dimensions of the Cmpp Object
Initialize Initialize Data for the Cmpp Model
LogLike1 Compute the Log-Likelihood for the Model
log_f_rcpp Compute the Log-Likelihood Function Generalized odds rate (GOR)
log_f_rcpp2 Compute the Log-Likelihood Function Proportional Odds Model (POM)
log_f_rcpp3 Compute the Log-Likelihood Function Proportional Hazards Model (PHM)
makeMat Create a matrix of given size filled with a constant value
make_Dummy Create Dummy Variables
pdf_gomp Compute the PDF of the Gompertz Distribution