* using log directory 'd:/Rcompile/CRANpkg/local/4.7/nlfh.Rcheck'
* using R Under development (unstable) (2026-07-28 r90311 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-07-29 16:02:24 UTC
* checking for file 'nlfh/DESCRIPTION' ... OK
* this is package 'nlfh' version '0.1.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'nlfh' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s] OK
* checking whether the package can be unloaded cleanly ... [0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s] OK
* checking loading without being on the library search path ... [0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [1s] ERROR
Running examples in 'nlfh-Ex.R' failed
The error most likely occurred in:

> ### Name: fit_fh
> ### Title: Fit a Fay-Herriot Model
> ### Aliases: fit_fh
> 
> ### ** Examples
> 
> data(acs_dat)
> acs_small <- as.data.frame(acs_dat[1:500, ])
> example_control <- list(n_iter = 50, burn_in = 25, progress = FALSE)
> 
> fit_linear <- fit_fh(
+   MedInc ~ SNAPRate + PovRate + White + Black + Hispanic + Asian,
+   sampling_variance = MedIncSE^2,
+   data = acs_small,
+   method = "linear",
+   control = example_control
+ )
> 
> X <- model.matrix(
+   MedInc ~ SNAPRate + PovRate + White + Black + Hispanic + Asian,
+   data = acs_small
+ )
> fit_matrix <- fit_fh(
+   y = acs_small$MedInc,
+   X = X,
+   sampling_variance = acs_small$MedIncSE^2,
+   method = "linear",
+   control = example_control
+ )
> 
> fit_rnn <- fit_fh(
+   MedInc ~ .,
+   sampling_variance = MedIncSE^2,
+   data = acs_small,
+   method = "rnn",
+   control = example_control
+ )
> 
> fit_bart <- fit_fh(
+   MedInc ~ SNAPRate + PovRate + White,
+   sampling_variance = MedIncSE^2,
+   data = acs_small,
+   method = "bart",
+   control = example_control
+ )
Error in parse(text = deparse(RNGkind)[-1L]) : 
  <text>:1:22: unexpected ')'
1:     binom.kind = NULL)
                         ^
Calls: fit_fh ... validObject -> anyStrings -> isTRUE -> validityMethod -> parse
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [4s] ERROR
  Running 'spelling.R' [0s]
  Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(nlfh)
  > 
  > test_check("nlfh")
  Saving _problems/test-core-api-24.R
  Saving _problems/test-core-api-60.R
  Saving _problems/test-core-api-102.R
  Saving _problems/test-core-api-151.R
  Saving _problems/test-core-api-202.R
  Saving _problems/test-formula-interface-33.R
  Saving _problems/test-formula-interface-64.R
  Saving _problems/test-posterior-draws-62.R
  Saving _problems/test-posterior-draws-86.R
  Saving _problems/test-summary-75.R
  [ FAIL 10 | WARN 0 | SKIP 0 | PASS 97 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-core-api.R:18:3'): all three methods return nlfh_fit objects with finite DIC ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-core-api.R:18:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-core-api.R:54:3'): output dimensions are consistent across methods ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-core-api.R:54:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-core-api.R:93:3'): method dispatch selects the requested model implementation ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. ├─testthat::expect_s3_class(...) at test-core-api.R:93:3
    2. │ └─testthat::quasi_label(enquo(object))
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. └─nlfh::fit_fh(...)
    5.   ├─base::do.call(fit_fh_bart, args)
    6.   └─nlfh (local) `<fn>`(...)
    7.     └─dbarts::dbartsControl(...)
    8.       └─methods::new(...)
    9.         ├─methods::initialize(value, ...)
   10.         └─dbarts (local) initialize(value, ...)
   11.           ├─methods::callNextMethod()
   12.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   13.             └─methods::validObject(.Object)
   14.               ├─methods (local) anyStrings(validityMethod(object))
   15.               │ └─base::isTRUE(x)
   16.               └─dbarts (local) validityMethod(object)
   17.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-core-api.R:139:3'): method-specific fitting functions are public-facing ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. ├─testthat::expect_s3_class(...) at test-core-api.R:139:3
    2. │ └─testthat::quasi_label(enquo(object))
    3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
    4. └─nlfh::fit_fh_bart(...)
    5.   └─dbarts::dbartsControl(...)
    6.     └─methods::new(...)
    7.       ├─methods::initialize(value, ...)
    8.       └─dbarts (local) initialize(value, ...)
    9.         ├─methods::callNextMethod()
   10.         └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   11.           └─methods::validObject(.Object)
   12.             ├─methods (local) anyStrings(validityMethod(object))
   13.             │ └─base::isTRUE(x)
   14.             └─dbarts (local) validityMethod(object)
   15.               └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-core-api.R:191:3'): random-effect variance prior controls are accepted for all methods ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-core-api.R:191:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-formula-interface.R:27:3'): formula interface works for nonlinear methods ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-formula-interface.R:27:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-formula-interface.R:58:3'): fit_fh dispatches all model families from formula inputs ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-formula-interface.R:58:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-posterior-draws.R:56:3'): posterior_draws extracts u draws when available ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-posterior-draws.R:56:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-posterior-draws.R:80:3'): posterior_draws gives helpful errors for unavailable variables ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-posterior-draws.R:80:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  ── Error ('test-summary.R:69:3'): summary.nlfh_fit handles BART fits without coefficient summaries ──
  Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')'
  1:     binom.kind = NULL)
                           ^
  Backtrace:
       ▆
    1. └─nlfh::fit_fh(...) at test-summary.R:69:3
    2.   ├─base::do.call(fit_fh_bart, args)
    3.   └─nlfh (local) `<fn>`(...)
    4.     └─dbarts::dbartsControl(...)
    5.       └─methods::new(...)
    6.         ├─methods::initialize(value, ...)
    7.         └─dbarts (local) initialize(value, ...)
    8.           ├─methods::callNextMethod()
    9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
   10.             └─methods::validObject(.Object)
   11.               ├─methods (local) anyStrings(validityMethod(object))
   12.               │ └─base::isTRUE(x)
   13.               └─dbarts (local) validityMethod(object)
   14.                 └─base::parse(text = deparse(RNGkind)[-1L])
  
  [ FAIL 10 | WARN 0 | SKIP 0 | PASS 97 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [2s] ERROR
Error(s) in re-building vignettes:
--- re-building 'model-comparison.Rmd' using rmarkdown

Quitting from model-comparison.Rmd:54-80 [fit-models]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `parse()`:
! <text>:1:22: unexpected ')'
1:     binom.kind = NULL)
                         ^
---
Backtrace:
     ▆
  1. └─nlfh::fit_fh(...)
  2.   ├─base::do.call(fit_fh_bart, args)
  3.   └─nlfh (local) `<fn>`(...)
  4.     └─dbarts::dbartsControl(...)
  5.       └─methods::new(...)
  6.         ├─methods::initialize(value, ...)
  7.         └─dbarts (local) initialize(value, ...)
  8.           ├─methods::callNextMethod()
  9.           └─methods (local) .nextMethod(.Object = .Object, ... = ...)
 10.             └─methods::validObject(.Object)
 11.               ├─methods (local) anyStrings(validityMethod(object))
 12.               │ └─base::isTRUE(x)
 13.               └─dbarts (local) validityMethod(object)
 14.                 └─base::parse(text = deparse(RNGkind)[-1L])
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'model-comparison.Rmd' failed with diagnostics:
<text>:1:22: unexpected ')'
1:     binom.kind = NULL)
                         ^
--- failed re-building 'model-comparison.Rmd'

SUMMARY: processing the following file failed:
  'model-comparison.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [20s] OK
* checking HTML version of manual ... [1s] OK
* DONE
Status: 3 ERRORs