d39e085aafd51fd1e88d4de777806c1f *DESCRIPTION
56b9bf297754f314e5fd986790ab5b66 *NAMESPACE
02b33d4b33afa949272f5b2a1f4fb29d *NEWS.md
56f318c9a9a7a84b8bbd000b9984f8c3 *R/accessors.R
6c74c2bbb265d34000bd42ea9bf0233f *R/bayesTLS-package.R
cf33cf308e3d261aae42cb4a64fe3c2c *R/bayes_tls_methods.R
ac0048670a7ce68e3e227d179f8f43f9 *R/data.R
ded0e5a32683fb7922f8b7204085f914 *R/derive_tdt.R
46576d73a2dc5dcea56fdc9d830acf1b *R/diagnostics.R
340e0abcb00a6d1e328869c182a0c15e *R/fit_4pl.R
eef6dd0de6056ab651a8d469c8fa1d25 *R/plotting.R
7a665735461457c42b5e6dd5142ef564 *R/predict_heat_injury.R
e3a5b46932f81653d8835c78fde4d004 *R/predict_survival_curves.R
2e6eeb5f58b8088472a9c740b7e5d152 *R/priors.R
a9c9af043f543b84b2c1ef6e254344be *R/repair.R
1654a184c8ccd7a99332d93da3d4b67e *R/standardize_data.R
4bbc89c6f04fa20510695637ea90fb3a *R/tdt_landscape.R
41c5c5a2b6d23b8cedfad3673f214faf *R/temperature_scenarios.R
24090f189d7a201b184598655f9d72d4 *R/tls.R
74e0d34731cc9804e04fdbab26accdf3 *R/tls_engine.R
5b814a8a4098cd5efdc584bda5de3d13 *R/two_stage.R
8be1772d774806b45cc8da390a616930 *R/utils.R
69baa10a02db565ea42777954cccf11b *R/zzz.R
b7ece5858ec5b8124ca328bc0c635644 *README.md
f51ba7c8bc94d8cf1fd072b85c6e53ab *build/partial.rdb
f759d63fe771afe8f0a2b61f5329eba5 *data/aphid_tdt.rda
7e8f0813293ed74854585f49516a8dfb *data/dsuzukii.rda
78b081de3a71f0eb3274bd473d42e538 *data/snowgum_psii.rda
6d1e9b7701ca070a6e6d45f636ecb0d4 *data/zebrafish_o2.rda
197691f805cc1c5e6a4d7b950de4f350 *inst/CITATION
043de709dbb48f20a0a96f2e15d6f11c *inst/extdata/data_function_PSII_TDT_snowgum.csv
b54fd4c68f3034069e812cb1b3c235d3 *inst/extdata/data_function_PSII_TDT_snowgum_glasshouse.csv
388dc5c77e278f382459c4f23f4ccb1c *inst/extdata/data_lethal_TDT_aphid.csv
c27edfa7f104b02590978a37cb38e309 *inst/extdata/data_lethal_TDT_zebrafish_oxygen.csv
e72747c7c27429639347e4498641bebe *inst/extdata/data_multitrait_TDT_drosophila_suzukii.csv
61f821f4056f200320edbab5d284c9c4 *man/aphid_tdt.Rd
8dd71c1be6c00d5c3677e6f5a334a671 *man/bayesTLS-package.Rd
83f83606b3c4c0ee81d7a927d4f4ea5e *man/bayes_R2_tls.Rd
d3da7c0b39a8b37e8935e6a95a8c41f8 *man/clock_to_minutes.Rd
e9b6c37ebb9e51cb01a2ebe07adefc12 *man/compute_4pl_bounds.Rd
5b09f4baac38e256aee0df780325c676 *man/derive_tdt_curve.Rd
83ae3b889bccfb0a00f136074f2af0a7 *man/derive_tdt_landscape.Rd
8c01bdda731b7fc8582627cfaabe9b54 *man/derive_temperature_for_duration.Rd
fe189c884d46f324d834b2df81ae99ea *man/derive_z.Rd
4279175edb34ed55d407144df29fe564 *man/diagnose_tdt_fit.Rd
5e4556eed599cbd9af95e032f380cdbb *man/dsuzukii.Rd
d6a1b7a340aa34a00198f276810f4e90 *man/extract_4pl_pars.Rd
24044a5127e557aa3dde8cbcc9bdf90d *man/fit_4pl.Rd
ac1b93930eeb1189c41a73f01407068f *man/format_interval.Rd
287f4489195dcb01e7478442aac17a12 *man/get_4pl_est.Rd
2b3cbb09bdc03a8ecf136130a6909d75 *man/get_brmsfit.Rd
34073b0c0a5db1d8fbf84184ba2abefb *man/get_hi_draws.Rd
c4f475cbcefd7753927b54a85c65daf6 *man/get_surv_draws.Rd
1ebe37273c156d9201ab5d0c8a2878f4 *man/get_tls_est.Rd
7fc3152cbf9ba03686e0f537550c98e7 *man/has_fit.Rd
84d3bc2c9189508414449182f0735259 *man/hi_local_curves.Rd
cefe1fc3311151f25f390b57639c3fef *man/hi_pars.Rd
f972e197ec428844e6c6a878cf2e609b *man/make_4pl_formula.Rd
34832c40e22ab3a94c8828e74e727433 *man/make_4pl_priors.Rd
70859861bf15971bbb1d0c8994a39a38 *man/make_temperature_scenarios.Rd
8e5a0927ab051513b8f7c2e7a0ae5f9c *man/new_tdt_grid.Rd
bbb260336026b4fec086e0ad47ac4a9f *man/planted_dose_from_trace.Rd
6fb9ebfde0f0ad7b4eaa6ec10e6fedc2 *man/plot.bayes_tls.Rd
3f897ff4c722616f87bd13872d114188 *man/plot_heat_injury.Rd
cb6815151a41f1207af657da0d0cad20 *man/plot_repair_rate.Rd
b8e61a4c30ec3e9df14c674d751e0a77 *man/plot_survival_curves.Rd
2b8e609fa28953eeb0debe9d1504da26 *man/plot_tdt_curve.Rd
35220f35a771bd9fc6bac2e220258d7f *man/plot_tdt_landscape.Rd
0fa4aa814749a8e51da5e99b13b3b305 *man/plot_temperature_density.Rd
44e463197ef1c8bc3751b53796509fe5 *man/plot_temperature_scenarios.Rd
dc6581933d3408732eab63657e162ed2 *man/posterior_linpred_tdt.Rd
f82b76f21d04dfce078407836e2bd668 *man/predict_heat_injury.Rd
0ce9789302b514796c943855db08aefd *man/predict_survival_curves.Rd
eed4191f86e959e4369c40ffa7ae8cd9 *man/print.bayes_tls.Rd
2869a4a862c472c3341878813e319bb8 *man/repair_rate_schoolfield.Rd
d6fc0c9cc8d54386754ae76e191f80f8 *man/resolve_target_surv.Rd
591b9a1c61cc3aaa5f46da11ab76a205 *man/snowgum_psii.Rd
eca9d1eed807a92a421e1b13b57b0d07 *man/standardize_data.Rd
558b29c95fa48a643193a96c0db66683 *man/summarise_observed_survival.Rd
3e0fbb6245817a65ccf7fc5d660c2964 *man/summary.bayes_tls.Rd
1f56042e8ddeab4dc68810d4b582f944 *man/survival_from_dose.Rd
7545da10acde1589b508629ee3c15ad0 *man/tdt_check_columns.Rd
060e0077f6965ea3981718bbebf4aa1c *man/tdt_format_random_effects.Rd
b1ba57d0fda78bb7882d7d98d845b96a *man/tdt_parameter_table.Rd
cc4d5a595daaa77bb30b05e046c28a38 *man/tdt_quantile.Rd
72ca96e3d01f2d469ec98f75ee777a78 *man/tdt_random_effect_variables.Rd
34cdcac0603ef852140a0e8ed0cb26a4 *man/tdt_resolve_t_ref.Rd
516e0a7aeba0266effdbfe32ed85c1da *man/tdt_resolve_time_multiplier.Rd
0adffdafffd45918be118449cc6aaf49 *man/tdt_unit_to_minutes.Rd
5922068de0b598b5770a226fe8d5b0e5 *man/theme_tdt.Rd
6f0dca6135537a08d45ef602265a4050 *man/threshold_x_by_draw.Rd
a59a399819ebf7ef386d33b9e145f5e9 *man/time_to_surv_threshold_4pl.Rd
78f44efe7c0a2fcca9633db5ac8511a6 *man/tls.Rd
f6c55d1089ae2f5b2e3f9f3f9c0a2635 *man/ts_ci.Rd
c92208afafd158df25ff1918fe5c7175 *man/ts_curve.Rd
f44b82e2178f91a56ce7ce8894e0137c *man/ts_stage1.Rd
ffae9345600d21ff84195be3c8a2f5f9 *man/ts_stage2.Rd
0c72f3f9474c58df3f797f4fd43a6a9e *man/zebrafish_o2.Rd
337996980f10254f17456334d50b493a *tests/testthat.R
957708e9e5f54526b5dd2a3ead8dac58 *tests/testthat/helper-simulate.R
454ab1c6bb306c24f504167b435eb988 *tests/testthat/helper-skip.R
bda1e704943f04400506ea4d31543cc1 *tests/testthat/helper-source.R
d181a6f3a1bf1fe77440f2d1fb31c7e3 *tests/testthat/setup.R
e2c08f86b521f55bd5213e37ec9c78c1 *tests/testthat/test-accessors.R
4bf595f8658b5ff92509269fc45963a4 *tests/testthat/test-bayes_tls_methods.R
76035d887160dc18eeb16955d07489b3 *tests/testthat/test-continuous-moderators.R
8ce3762177f3cbe1ecd3d7ef56fdf66c *tests/testthat/test-derive_z.R
c7642a3fe8ebdfe868e1dfe08b263368 *tests/testthat/test-diagnostics.R
5fd3d3bd309cc2b0bd3e62d1dbfed044 *tests/testthat/test-direct-extract.R
89c660fa65de3d207865121aec7c5d5e *tests/testthat/test-direct-fixture.R
c9b001acfe916ba70401f05ac6833223 *tests/testthat/test-direct-formula.R
b94529f1703500710cc3d850025f715e *tests/testthat/test-direct-grouped.R
74dcc77396cac8270746fefd4a56e893 *tests/testthat/test-direct-priors.R
055f6bc9a4ced128f3e3531faa858998 *tests/testthat/test-extract_4pl_pars.R
0afebb45eb1ff17d19aca2c05a0bf052 *tests/testthat/test-fit_4pl.R
c9578abd3531ae74a9096cd5f4b04795 *tests/testthat/test-fit_4pl_beta.R
7cd3b2ca82d41a85efc3718216218795 *tests/testthat/test-midpoint-formula.R
929a36500289a035cf782b6c7908f548 *tests/testthat/test-midpoint-grouped.R
0f60645b479a583a22c768e979d916ce *tests/testthat/test-plotting.R
aa0eff82900973e780a8871a4da7fa7d *tests/testthat/test-predict_heat_injury.R
85f2f3cbf11f1e55eff8b8c6aeb179d6 *tests/testthat/test-predict_survival_curves.R
b9097db4d0eee2f8efb0cbb8a764b399 *tests/testthat/test-priors.R
d00dc9563fc45b694378a3219e12db16 *tests/testthat/test-repair.R
7f8c48c3daee706f78449ffe5a0b3cd5 *tests/testthat/test-standardize_data.R
d7c63a24bdfc28b234745529f410d0e4 *tests/testthat/test-tdt-ctmax-vectorised.R
e97e75a9d4dea92429f777bbd886fbf5 *tests/testthat/test-tdt-z-local-gate.R
e5afce8b7f60eb19aaad418d2525cd2c *tests/testthat/test-tdt_landscape.R
ee1ba4a17ef47db8f8f6a8cc59df0c50 *tests/testthat/test-temperature_scenarios.R
dcfc7e04789e16caf0e9c87e9034e4b5 *tests/testthat/test-tls-engine.R
f6c535a749d7301fb405a34d3ab22585 *tests/testthat/test-tls.R
ccf3e418311ba5b6f1a6094f2e505ca2 *tests/testthat/test-two-group-recovery.R
3a3e31c3f840ad74018a93fa300dd7f2 *tests/testthat/test-two_stage.R
ba7f3bdd73bb4313388ca019cef8205e *tests/testthat/test-unify-parity.R
0ff9a2cb366c92367911e200867f886a *tests/testthat/test-utils.R
