FigureSclerosis     (Fig 1 of Fay, Brittain, Proschan, 2013.) Plots Kaplan-Meier together with several confidence interval for Nash et al data
FigureWilms     (Fig 3 of Fay, Brittain, Proschan, 2013.) Plots Kaplan-Meier together with 2 confidence intervals for National Wilms Tumor data
Simulation2013     Does most of Simulations for Fay, Brittain, Proschan (2013, Biostatistics, 723-736) (except unconstrained bootstrap). Actual simulations took over a week to run. See code to set number of reps.
SimulationBootOnly2013     Does Unconstrained bootstrap Simulation for Fay, Brittain, Proschan (2013). Requested by reviewer, and done after initial submission. 
NotesMMandMC       Script for producing the figures in the Notes on method of moments and Monte carlo methods for calculating BPCP.
Simulation2015     Simulations for Fay Brittain (2016, Statistics in Medicine, 2726-2740), which used monotonic option and included mid-p version. Took several days to run.
PlottingTransformationFigures   Plot the transformation figures (Figure 1) Fay, Mateja, and Grieco, 2026
Calculation2025_no_censoring  Calculation of coverage for the no censoring case (Figures S4-S6) Fay, Mateja, and Grieco, 2026
Calculation2026_no_censoring   Calculation of coverage for the no censoring case (Figures 2 and S3) Fay, Mateja, and Grieco, 2026
Simulation2026_discrete_functions  Does discrete simulation for Fay, Mateja, and Grieco (2026) parmtype='efflogs'
Simulation2026_discrete_summary   R code to summarize and plot the results of the 2026 discrete simulation
Sim2026_functions                R functions for main simulations of Section 7 of Fay, Mateja, and Grieco, 2026
sim2026_runCode                  R script with example code to run one of the sample size and censoring cases in Section 7 of Fay, Mateja, and Grieco, 2026
sim2026_plotResults              R script to plot results of simulations in Section 7 of Fay, Mateja, and Grieco, 2026
