CRAN Package Check Results for Package Epi

Last updated on 2025-12-20 21:49:31 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.61 22.91 431.52 454.43 ERROR
r-devel-linux-x86_64-debian-gcc 2.61 15.24 298.82 314.06 ERROR
r-devel-linux-x86_64-fedora-clang 2.61 39.00 666.92 705.92 ERROR
r-devel-linux-x86_64-fedora-gcc 2.61 36.00 683.54 719.54 ERROR
r-devel-windows-x86_64 2.61 30.00 277.00 307.00 OK --no-vignettes
r-patched-linux-x86_64 2.61 23.58 454.59 478.17 OK
r-release-linux-x86_64 2.61 20.76 456.95 477.71 OK
r-release-macos-arm64 2.61 OK
r-release-macos-x86_64 2.61 16.00 580.00 596.00 OK
r-release-windows-x86_64 2.61 29.00 239.00 268.00 OK --no-vignettes
r-oldrel-macos-arm64 2.61 OK
r-oldrel-macos-x86_64 2.61 16.00 612.00 628.00 OK
r-oldrel-windows-x86_64 2.61 36.00 287.00 323.00 OK --no-vignettes

Check Details

Version: 2.61
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘01flup.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv Error: processing vignette '01flup.rnw' failed with diagnostics: chunk 12 Error in `[.data.table`(l, , `:=`((tmp_ie), shift(.SD, n = 1, type = "lead")), : attempt access index 14/14 in VECTOR_ELT --- failed re-building ‘01flup.rnw’ --- re-building ‘02addLexis.rnw’ using Sweave Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union Joining with `by = join_by(lex.id)` Joining with `by = join_by(lex.id)` Joining with `by = join_by(lex.id)` --- finished re-building ‘02addLexis.rnw’ --- re-building ‘03crisk.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘03crisk.rnw’ --- re-building ‘04simLexis.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘04simLexis.rnw’ --- re-building ‘05yll.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘05yll.rnw’ SUMMARY: processing the following file failed: ‘01flup.rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.61
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘01flup.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv Error: processing vignette '01flup.rnw' failed with diagnostics: chunk 12 Error in `[.data.table`(l, , `:=`((tmp_ie), shift(.SD, n = 1, type = "lead")), : attempt access index 14/14 in VECTOR_ELT --- failed re-building ‘01flup.rnw’ --- re-building ‘02addLexis.rnw’ using Sweave Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union Joining with `by = join_by(lex.id)` Joining with `by = join_by(lex.id)` Joining with `by = join_by(lex.id)` --- finished re-building ‘02addLexis.rnw’ --- re-building ‘03crisk.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘03crisk.rnw’ --- re-building ‘04simLexis.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘04simLexis.rnw’ --- re-building ‘05yll.rnw’ using Sweave Attaching package: ‘survival’ The following object is masked from ‘package:popEpi’: Surv --- finished re-building ‘05yll.rnw’ SUMMARY: processing the following file failed: ‘01flup.rnw’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc