Last updated on 2025-03-17 00:49:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.7.0 | 51.95 | 449.27 | 501.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 3.7.0 | 32.30 | 257.14 | 289.44 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 3.7.0 | ERROR | ||||
| r-devel-linux-x86_64-fedora-gcc | 3.7.0 | 654.40 | ERROR | |||
| r-devel-macos-arm64 | 3.7.0 | 110.00 | OK | |||
| r-devel-macos-x86_64 | 3.7.0 | 298.00 | OK | |||
| r-devel-windows-x86_64 | 3.7.0 | 49.00 | 365.00 | 414.00 | OK | |
| r-patched-linux-x86_64 | 3.7.0 | 55.99 | 407.26 | 463.25 | OK | |
| r-release-linux-x86_64 | 3.7.0 | 47.44 | 348.73 | 396.17 | ERROR | |
| r-release-macos-arm64 | 3.7.0 | 171.00 | NOTE | |||
| r-release-macos-x86_64 | 3.7.0 | 346.00 | NOTE | |||
| r-release-windows-x86_64 | 3.7.0 | 55.00 | 352.00 | 407.00 | NOTE | |
| r-oldrel-macos-arm64 | 3.7.0 | 186.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 3.7.0 | 475.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 3.7.0 | 70.00 | 441.00 | 511.00 | NOTE |
Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_datSum_examples.Rmd’
--- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_est.Rmd’
--- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_pop.Rmd’
--- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_DB.Rmd’
--- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown
Quitting from FIESTA_tutorial_GB.Rmd:293-308 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! x must be character or SQL
---
Backtrace:
▆
1. └─FIESTA::DBqryCSV(qry, states = "Wyoming", sqltables = "POP_STRATUM")
2. └─sqldf::sqldf(sql, stringsAsFactors = FALSE)
3. ├─DBI::dbWriteTable(connection, nam, DF, row.names = row.names)
4. └─RSQLite::dbWriteTable(connection, nam, DF, row.names = row.names)
5. └─RSQLite (local) .local(conn, name, value, ...)
6. ├─DBI::dbCreateTable(...)
7. └─DBI::dbCreateTable(...)
8. ├─DBI::sqlCreateTable(...)
9. └─DBI::sqlCreateTable(...)
10. ├─DBI::dbQuoteIdentifier(con, names(fields))
11. └─DBI::dbQuoteIdentifier(con, names(fields))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics:
x must be character or SQL
--- failed re-building ‘FIESTA_tutorial_GB.Rmd’
--- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png
288x288 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4406 bytes
Input file size = 5261 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3977
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965
Output IDAT size = 3965 bytes (441 bytes decrease)
Output file size = 4043 bytes (1218 bytes = 23.15% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5789 bytes
Input file size = 6647 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5355
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313
Output IDAT size = 5313 bytes (476 bytes decrease)
Output file size = 5391 bytes (1256 bytes = 18.90% decrease)
--- finished re-building ‘FIESTA_tutorial_MA.Rmd’
--- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26632 bytes
Input file size = 26746 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718
Output IDAT size = 20718 bytes (5914 bytes decrease)
Output file size = 20796 bytes (5950 bytes = 22.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7380 bytes
Input file size = 8238 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762
Output IDAT size = 6762 bytes (618 bytes decrease)
Output file size = 6840 bytes (1398 bytes = 16.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7270 bytes
Input file size = 8128 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6591
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559
Output IDAT size = 6559 bytes (711 bytes decrease)
Output file size = 6637 bytes (1491 bytes = 18.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18316 bytes
Input file size = 18418 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127
Output IDAT size = 14127 bytes (4189 bytes decrease)
Output file size = 14205 bytes (4213 bytes = 22.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5182 bytes
Input file size = 6040 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4588
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566
Output IDAT size = 4566 bytes (616 bytes decrease)
Output file size = 4644 bytes (1396 bytes = 23.11% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6639 bytes
Input file size = 7497 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6065
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031
Output IDAT size = 6031 bytes (608 bytes decrease)
Output file size = 6109 bytes (1388 bytes = 18.51% decrease)
--- finished re-building ‘FIESTA_tutorial_PB.Rmd’
--- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8691 bytes
Input file size = 8781 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082
Output IDAT size = 7082 bytes (1609 bytes decrease)
Output file size = 7160 bytes (1621 bytes = 18.46% decrease)
--- finished re-building ‘FIESTA_tutorial_SA.Rmd’
--- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4714 bytes
Input file size = 5572 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
Output IDAT size = 4196 bytes (518 bytes decrease)
Output file size = 4274 bytes (1298 bytes = 23.30% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4714 bytes
Input file size = 5572 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
Output IDAT size = 4196 bytes (518 bytes decrease)
Output file size = 4274 bytes (1298 bytes = 23.30% decrease)
--- finished re-building ‘FIESTA_tutorial_dat.Rmd’
--- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_sp.Rmd’
SUMMARY: processing the following file failed:
‘FIESTA_tutorial_GB.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_datSum_examples.Rmd’
--- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_est.Rmd’
--- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_pop.Rmd’
--- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_DB.Rmd’
--- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown
Quitting from lines 294-308 [unnamed-chunk-10] (FIESTA_tutorial_GB.Rmd)
Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics:
x must be character or SQL
--- failed re-building ‘FIESTA_tutorial_GB.Rmd’
--- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png
288x288 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3831 bytes
Input file size = 4686 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3492
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448
Output IDAT size = 3448 bytes (383 bytes decrease)
Output file size = 3526 bytes (1160 bytes = 24.75% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5720 bytes
Input file size = 6578 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5305
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252
Output IDAT size = 5252 bytes (468 bytes decrease)
Output file size = 5330 bytes (1248 bytes = 18.97% decrease)
--- finished re-building ‘FIESTA_tutorial_MA.Rmd’
--- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26594 bytes
Input file size = 26708 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281
Output IDAT size = 19281 bytes (7313 bytes decrease)
Output file size = 19359 bytes (7349 bytes = 27.52% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7405 bytes
Input file size = 8263 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776
Output IDAT size = 6776 bytes (629 bytes decrease)
Output file size = 6854 bytes (1409 bytes = 17.05% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7232 bytes
Input file size = 8090 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6557
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511
Output IDAT size = 6511 bytes (721 bytes decrease)
Output file size = 6589 bytes (1501 bytes = 18.55% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18139 bytes
Input file size = 18241 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519
Output IDAT size = 12519 bytes (5620 bytes decrease)
Output file size = 12597 bytes (5644 bytes = 30.94% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5158 bytes
Input file size = 6016 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4607
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565
Output IDAT size = 4565 bytes (593 bytes decrease)
Output file size = 4643 bytes (1373 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6586 bytes
Input file size = 7444 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6083
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023
Output IDAT size = 6023 bytes (563 bytes decrease)
Output file size = 6101 bytes (1343 bytes = 18.04% decrease)
--- finished re-building ‘FIESTA_tutorial_PB.Rmd’
--- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8679 bytes
Input file size = 8769 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823
Output IDAT size = 6823 bytes (1856 bytes decrease)
Output file size = 6901 bytes (1868 bytes = 21.30% decrease)
--- finished re-building ‘FIESTA_tutorial_SA.Rmd’
--- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4695 bytes
Input file size = 5553 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
Output IDAT size = 4188 bytes (507 bytes decrease)
Output file size = 4266 bytes (1287 bytes = 23.18% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4695 bytes
Input file size = 5553 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
Output IDAT size = 4188 bytes (507 bytes decrease)
Output file size = 4266 bytes (1287 bytes = 23.18% decrease)
--- finished re-building ‘FIESTA_tutorial_dat.Rmd’
--- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_sp.Rmd’
SUMMARY: processing the following file failed:
‘FIESTA_tutorial_GB.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_datSum_examples.Rmd’
--- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_est.Rmd’
--- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_pop.Rmd’
--- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_DB.Rmd’
--- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown
Quitting from FIESTA_tutorial_GB.Rmd:293-308 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! x must be character or SQL
---
Backtrace:
▆
1. └─FIESTA::DBqryCSV(qry, states = "Wyoming", sqltables = "POP_STRATUM")
2. └─sqldf::sqldf(sql, stringsAsFactors = FALSE)
3. ├─DBI::dbWriteTable(connection, nam, DF, row.names = row.names)
4. └─RSQLite::dbWriteTable(connection, nam, DF, row.names = row.names)
5. └─RSQLite (local) .local(conn, name, value, ...)
6. ├─DBI::dbCreateTable(...)
7. └─DBI::dbCreateTable(...)
8. ├─DBI::sqlCreateTable(...)
9. └─DBI::sqlCreateTable(...)
10. ├─DBI::dbQuoteIdentifier(con, names(fields))
11. └─DBI::dbQuoteIdentifier(con, names(fields))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics:
x must be character or SQL
--- failed re-building ‘FIESTA_tutorial_GB.Rmd’
--- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png
288x288 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3831 bytes
Input file size = 4686 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3492
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448
Output IDAT size = 3448 bytes (383 bytes decrease)
Output file size = 3526 bytes (1160 bytes = 24.75% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5720 bytes
Input file size = 6578 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5305
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252
Output IDAT size = 5252 bytes (468 bytes decrease)
Output file size = 5330 bytes (1248 bytes = 18.97% decrease)
--- finished re-building ‘FIESTA_tutorial_MA.Rmd’
--- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26594 bytes
Input file size = 26708 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281
Output IDAT size = 19281 bytes (7313 bytes decrease)
Output file size = 19359 bytes (7349 bytes = 27.52% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7405 bytes
Input file size = 8263 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776
Output IDAT size = 6776 bytes (629 bytes decrease)
Output file size = 6854 bytes (1409 bytes = 17.05% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7232 bytes
Input file size = 8090 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6557
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511
Output IDAT size = 6511 bytes (721 bytes decrease)
Output file size = 6589 bytes (1501 bytes = 18.55% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18139 bytes
Input file size = 18241 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519
Output IDAT size = 12519 bytes (5620 bytes decrease)
Output file size = 12597 bytes (5644 bytes = 30.94% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5158 bytes
Input file size = 6016 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4607
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565
Output IDAT size = 4565 bytes (593 bytes decrease)
Output file size = 4643 bytes (1373 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6586 bytes
Input file size = 7444 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6083
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023
Output IDAT size = 6023 bytes (563 bytes decrease)
Output file size = 6101 bytes (1343 bytes = 18.04% decrease)
--- finished re-building ‘FIESTA_tutorial_PB.Rmd’
--- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8679 bytes
Input file size = 8769 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823
Output IDAT size = 6823 bytes (1856 bytes decrease)
Output file size = 6901 bytes (1868 bytes = 21.30% decrease)
--- finished re-building ‘FIESTA_tutorial_SA.Rmd’
--- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7649 bytes
Input file size = 8507 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203
Output IDAT size = 7203 bytes (446 bytes decrease)
Output file size = 7281 bytes (1226 bytes = 14.41% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4695 bytes
Input file size = 5553 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
Output IDAT size = 4188 bytes (507 bytes decrease)
Output file size = 4266 bytes (1287 bytes = 23.18% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4695 bytes
Input file size = 5553 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188
Output IDAT size = 4188 bytes (507 bytes decrease)
Output file size = 4266 bytes (1287 bytes = 23.18% decrease)
--- finished re-building ‘FIESTA_tutorial_dat.Rmd’
--- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_sp.Rmd’
SUMMARY: processing the following file failed:
‘FIESTA_tutorial_GB.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_datSum_examples.Rmd’
--- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_est.Rmd’
--- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_manual_mod_pop.Rmd’
--- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_DB.Rmd’
--- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown
Quitting from lines 294-308 [unnamed-chunk-10] (FIESTA_tutorial_GB.Rmd)
Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics:
x must be character or SQL
--- failed re-building ‘FIESTA_tutorial_GB.Rmd’
--- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png
288x288 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4406 bytes
Input file size = 5261 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3977
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965
Output IDAT size = 3965 bytes (441 bytes decrease)
Output file size = 4043 bytes (1218 bytes = 23.15% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5789 bytes
Input file size = 6647 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5355
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313
Output IDAT size = 5313 bytes (476 bytes decrease)
Output file size = 5391 bytes (1256 bytes = 18.90% decrease)
--- finished re-building ‘FIESTA_tutorial_MA.Rmd’
--- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26632 bytes
Input file size = 26746 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718
Output IDAT size = 20718 bytes (5914 bytes decrease)
Output file size = 20796 bytes (5950 bytes = 22.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7380 bytes
Input file size = 8238 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762
Output IDAT size = 6762 bytes (618 bytes decrease)
Output file size = 6840 bytes (1398 bytes = 16.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7270 bytes
Input file size = 8128 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6591
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559
Output IDAT size = 6559 bytes (711 bytes decrease)
Output file size = 6637 bytes (1491 bytes = 18.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18316 bytes
Input file size = 18418 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127
Output IDAT size = 14127 bytes (4189 bytes decrease)
Output file size = 14205 bytes (4213 bytes = 22.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 5182 bytes
Input file size = 6040 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4588
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566
Output IDAT size = 4566 bytes (616 bytes decrease)
Output file size = 4644 bytes (1396 bytes = 23.11% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6639 bytes
Input file size = 7497 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6065
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031
Output IDAT size = 6031 bytes (608 bytes decrease)
Output file size = 6109 bytes (1388 bytes = 18.51% decrease)
--- finished re-building ‘FIESTA_tutorial_PB.Rmd’
--- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 8691 bytes
Input file size = 8781 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082
Output IDAT size = 7082 bytes (1609 bytes decrease)
Output file size = 7160 bytes (1621 bytes = 18.46% decrease)
--- finished re-building ‘FIESTA_tutorial_SA.Rmd’
--- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7691 bytes
Input file size = 8549 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165
Output IDAT size = 7165 bytes (526 bytes decrease)
Output file size = 7243 bytes (1306 bytes = 15.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4714 bytes
Input file size = 5572 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
Output IDAT size = 4196 bytes (518 bytes decrease)
Output file size = 4274 bytes (1298 bytes = 23.30% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4714 bytes
Input file size = 5572 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196
Output IDAT size = 4196 bytes (518 bytes decrease)
Output file size = 4274 bytes (1298 bytes = 23.30% decrease)
--- finished re-building ‘FIESTA_tutorial_dat.Rmd’
--- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown
--- finished re-building ‘FIESTA_tutorial_sp.Rmd’
SUMMARY: processing the following file failed:
‘FIESTA_tutorial_GB.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64
Version: 3.7.0
Check: installed package size
Result: NOTE
installed size is 11.5Mb
sub-directories of 1Mb or more:
R 5.6Mb
doc 2.1Mb
extdata 2.1Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64