CRAN Package Check Results for Package FIESTA

Last updated on 2025-03-17 06:56:28 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.7.0 51.95 449.27 501.22 OK
r-devel-linux-x86_64-debian-gcc 3.7.0 32.30 257.14 289.44 ERROR
r-devel-linux-x86_64-fedora-clang 3.7.0 ERROR
r-devel-linux-x86_64-fedora-gcc 3.7.0 654.40 ERROR
r-devel-macos-arm64 3.7.0 110.00 OK
r-devel-macos-x86_64 3.7.0 298.00 OK
r-devel-windows-x86_64 3.7.0 49.00 365.00 414.00 OK
r-patched-linux-x86_64 3.7.0 55.99 407.26 463.25 OK
r-release-linux-x86_64 3.7.0 47.44 348.73 396.17 ERROR
r-release-macos-arm64 3.7.0 171.00 NOTE
r-release-macos-x86_64 3.7.0 346.00 NOTE
r-release-windows-x86_64 3.7.0 55.00 352.00 407.00 NOTE
r-oldrel-macos-arm64 3.7.0 186.00 NOTE
r-oldrel-macos-x86_64 3.7.0 475.00 NOTE
r-oldrel-windows-x86_64 3.7.0 65.00 438.00 503.00 NOTE

Check Details

Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_datSum_examples.Rmd’ --- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_est.Rmd’ --- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_pop.Rmd’ --- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_DB.Rmd’ --- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown Quitting from FIESTA_tutorial_GB.Rmd:293-308 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! x must be character or SQL --- Backtrace: ▆ 1. └─FIESTA::DBqryCSV(qry, states = "Wyoming", sqltables = "POP_STRATUM") 2. └─sqldf::sqldf(sql, stringsAsFactors = FALSE) 3. ├─DBI::dbWriteTable(connection, nam, DF, row.names = row.names) 4. └─RSQLite::dbWriteTable(connection, nam, DF, row.names = row.names) 5. └─RSQLite (local) .local(conn, name, value, ...) 6. ├─DBI::dbCreateTable(...) 7. └─DBI::dbCreateTable(...) 8. ├─DBI::sqlCreateTable(...) 9. └─DBI::sqlCreateTable(...) 10. ├─DBI::dbQuoteIdentifier(con, names(fields)) 11. └─DBI::dbQuoteIdentifier(con, names(fields)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics: x must be character or SQL --- failed re-building ‘FIESTA_tutorial_GB.Rmd’ --- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png 288x288 pixels, 8 bits/pixel, 255 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4406 bytes Input file size = 5261 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3977 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965 Output IDAT size = 3965 bytes (441 bytes decrease) Output file size = 4043 bytes (1218 bytes = 23.15% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5789 bytes Input file size = 6647 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5355 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313 Output IDAT size = 5313 bytes (476 bytes decrease) Output file size = 5391 bytes (1256 bytes = 18.90% decrease) --- finished re-building ‘FIESTA_tutorial_MA.Rmd’ --- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26632 bytes Input file size = 26746 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718 Output IDAT size = 20718 bytes (5914 bytes decrease) Output file size = 20796 bytes (5950 bytes = 22.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7380 bytes Input file size = 8238 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762 Output IDAT size = 6762 bytes (618 bytes decrease) Output file size = 6840 bytes (1398 bytes = 16.97% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7270 bytes Input file size = 8128 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6591 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559 Output IDAT size = 6559 bytes (711 bytes decrease) Output file size = 6637 bytes (1491 bytes = 18.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18316 bytes Input file size = 18418 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127 Output IDAT size = 14127 bytes (4189 bytes decrease) Output file size = 14205 bytes (4213 bytes = 22.87% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5182 bytes Input file size = 6040 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4588 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566 Output IDAT size = 4566 bytes (616 bytes decrease) Output file size = 4644 bytes (1396 bytes = 23.11% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6639 bytes Input file size = 7497 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6065 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031 Output IDAT size = 6031 bytes (608 bytes decrease) Output file size = 6109 bytes (1388 bytes = 18.51% decrease) --- finished re-building ‘FIESTA_tutorial_PB.Rmd’ --- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8691 bytes Input file size = 8781 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082 Output IDAT size = 7082 bytes (1609 bytes decrease) Output file size = 7160 bytes (1621 bytes = 18.46% decrease) --- finished re-building ‘FIESTA_tutorial_SA.Rmd’ --- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) --- finished re-building ‘FIESTA_tutorial_dat.Rmd’ --- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_sp.Rmd’ SUMMARY: processing the following file failed: ‘FIESTA_tutorial_GB.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_datSum_examples.Rmd’ --- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_est.Rmd’ --- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_pop.Rmd’ --- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_DB.Rmd’ --- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown Quitting from lines 294-308 [unnamed-chunk-10] (FIESTA_tutorial_GB.Rmd) Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics: x must be character or SQL --- failed re-building ‘FIESTA_tutorial_GB.Rmd’ --- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png 288x288 pixels, 8 bits/pixel, 255 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 3831 bytes Input file size = 4686 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3492 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448 Output IDAT size = 3448 bytes (383 bytes decrease) Output file size = 3526 bytes (1160 bytes = 24.75% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5720 bytes Input file size = 6578 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5305 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252 Output IDAT size = 5252 bytes (468 bytes decrease) Output file size = 5330 bytes (1248 bytes = 18.97% decrease) --- finished re-building ‘FIESTA_tutorial_MA.Rmd’ --- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26594 bytes Input file size = 26708 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281 Output IDAT size = 19281 bytes (7313 bytes decrease) Output file size = 19359 bytes (7349 bytes = 27.52% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7405 bytes Input file size = 8263 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776 Output IDAT size = 6776 bytes (629 bytes decrease) Output file size = 6854 bytes (1409 bytes = 17.05% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7232 bytes Input file size = 8090 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6557 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511 Output IDAT size = 6511 bytes (721 bytes decrease) Output file size = 6589 bytes (1501 bytes = 18.55% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18139 bytes Input file size = 18241 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519 Output IDAT size = 12519 bytes (5620 bytes decrease) Output file size = 12597 bytes (5644 bytes = 30.94% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5158 bytes Input file size = 6016 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4607 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565 Output IDAT size = 4565 bytes (593 bytes decrease) Output file size = 4643 bytes (1373 bytes = 22.82% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6586 bytes Input file size = 7444 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6083 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023 Output IDAT size = 6023 bytes (563 bytes decrease) Output file size = 6101 bytes (1343 bytes = 18.04% decrease) --- finished re-building ‘FIESTA_tutorial_PB.Rmd’ --- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8679 bytes Input file size = 8769 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823 Output IDAT size = 6823 bytes (1856 bytes decrease) Output file size = 6901 bytes (1868 bytes = 21.30% decrease) --- finished re-building ‘FIESTA_tutorial_SA.Rmd’ --- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4695 bytes Input file size = 5553 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 Output IDAT size = 4188 bytes (507 bytes decrease) Output file size = 4266 bytes (1287 bytes = 23.18% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4695 bytes Input file size = 5553 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 Output IDAT size = 4188 bytes (507 bytes decrease) Output file size = 4266 bytes (1287 bytes = 23.18% decrease) --- finished re-building ‘FIESTA_tutorial_dat.Rmd’ --- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_sp.Rmd’ SUMMARY: processing the following file failed: ‘FIESTA_tutorial_GB.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_datSum_examples.Rmd’ --- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_est.Rmd’ --- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_pop.Rmd’ --- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_DB.Rmd’ --- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown Quitting from FIESTA_tutorial_GB.Rmd:293-308 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! x must be character or SQL --- Backtrace: ▆ 1. └─FIESTA::DBqryCSV(qry, states = "Wyoming", sqltables = "POP_STRATUM") 2. └─sqldf::sqldf(sql, stringsAsFactors = FALSE) 3. ├─DBI::dbWriteTable(connection, nam, DF, row.names = row.names) 4. └─RSQLite::dbWriteTable(connection, nam, DF, row.names = row.names) 5. └─RSQLite (local) .local(conn, name, value, ...) 6. ├─DBI::dbCreateTable(...) 7. └─DBI::dbCreateTable(...) 8. ├─DBI::sqlCreateTable(...) 9. └─DBI::sqlCreateTable(...) 10. ├─DBI::dbQuoteIdentifier(con, names(fields)) 11. └─DBI::dbQuoteIdentifier(con, names(fields)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics: x must be character or SQL --- failed re-building ‘FIESTA_tutorial_GB.Rmd’ --- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png 288x288 pixels, 8 bits/pixel, 255 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 3831 bytes Input file size = 4686 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3492 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3448 Output IDAT size = 3448 bytes (383 bytes decrease) Output file size = 3526 bytes (1160 bytes = 24.75% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5720 bytes Input file size = 6578 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5305 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5252 Output IDAT size = 5252 bytes (468 bytes decrease) Output file size = 5330 bytes (1248 bytes = 18.97% decrease) --- finished re-building ‘FIESTA_tutorial_MA.Rmd’ --- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26594 bytes Input file size = 26708 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19281 Output IDAT size = 19281 bytes (7313 bytes decrease) Output file size = 19359 bytes (7349 bytes = 27.52% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7405 bytes Input file size = 8263 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6776 Output IDAT size = 6776 bytes (629 bytes decrease) Output file size = 6854 bytes (1409 bytes = 17.05% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7232 bytes Input file size = 8090 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6557 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6511 Output IDAT size = 6511 bytes (721 bytes decrease) Output file size = 6589 bytes (1501 bytes = 18.55% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18139 bytes Input file size = 18241 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12519 Output IDAT size = 12519 bytes (5620 bytes decrease) Output file size = 12597 bytes (5644 bytes = 30.94% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5158 bytes Input file size = 6016 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4607 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4565 Output IDAT size = 4565 bytes (593 bytes decrease) Output file size = 4643 bytes (1373 bytes = 22.82% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6586 bytes Input file size = 7444 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6083 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6023 Output IDAT size = 6023 bytes (563 bytes decrease) Output file size = 6101 bytes (1343 bytes = 18.04% decrease) --- finished re-building ‘FIESTA_tutorial_PB.Rmd’ --- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8679 bytes Input file size = 8769 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6823 Output IDAT size = 6823 bytes (1856 bytes decrease) Output file size = 6901 bytes (1868 bytes = 21.30% decrease) --- finished re-building ‘FIESTA_tutorial_SA.Rmd’ --- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7649 bytes Input file size = 8507 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7203 Output IDAT size = 7203 bytes (446 bytes decrease) Output file size = 7281 bytes (1226 bytes = 14.41% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4695 bytes Input file size = 5553 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 Output IDAT size = 4188 bytes (507 bytes decrease) Output file size = 4266 bytes (1287 bytes = 23.18% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4695 bytes Input file size = 5553 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4247 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4188 Output IDAT size = 4188 bytes (507 bytes decrease) Output file size = 4266 bytes (1287 bytes = 23.18% decrease) --- finished re-building ‘FIESTA_tutorial_dat.Rmd’ --- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_sp.Rmd’ SUMMARY: processing the following file failed: ‘FIESTA_tutorial_GB.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 3.7.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_datSum_examples.Rmd’ --- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_est.Rmd’ --- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_pop.Rmd’ --- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_DB.Rmd’ --- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown Quitting from lines 294-308 [unnamed-chunk-10] (FIESTA_tutorial_GB.Rmd) Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics: x must be character or SQL --- failed re-building ‘FIESTA_tutorial_GB.Rmd’ --- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png 288x288 pixels, 8 bits/pixel, 255 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4406 bytes Input file size = 5261 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3977 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965 Output IDAT size = 3965 bytes (441 bytes decrease) Output file size = 4043 bytes (1218 bytes = 23.15% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5789 bytes Input file size = 6647 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5355 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313 Output IDAT size = 5313 bytes (476 bytes decrease) Output file size = 5391 bytes (1256 bytes = 18.90% decrease) --- finished re-building ‘FIESTA_tutorial_MA.Rmd’ --- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26632 bytes Input file size = 26746 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718 Output IDAT size = 20718 bytes (5914 bytes decrease) Output file size = 20796 bytes (5950 bytes = 22.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7380 bytes Input file size = 8238 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762 Output IDAT size = 6762 bytes (618 bytes decrease) Output file size = 6840 bytes (1398 bytes = 16.97% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7270 bytes Input file size = 8128 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6591 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559 Output IDAT size = 6559 bytes (711 bytes decrease) Output file size = 6637 bytes (1491 bytes = 18.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18316 bytes Input file size = 18418 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127 Output IDAT size = 14127 bytes (4189 bytes decrease) Output file size = 14205 bytes (4213 bytes = 22.87% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5182 bytes Input file size = 6040 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4588 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566 Output IDAT size = 4566 bytes (616 bytes decrease) Output file size = 4644 bytes (1396 bytes = 23.11% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6639 bytes Input file size = 7497 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6065 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031 Output IDAT size = 6031 bytes (608 bytes decrease) Output file size = 6109 bytes (1388 bytes = 18.51% decrease) --- finished re-building ‘FIESTA_tutorial_PB.Rmd’ --- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8691 bytes Input file size = 8781 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082 Output IDAT size = 7082 bytes (1609 bytes decrease) Output file size = 7160 bytes (1621 bytes = 18.46% decrease) --- finished re-building ‘FIESTA_tutorial_SA.Rmd’ --- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) --- finished re-building ‘FIESTA_tutorial_dat.Rmd’ --- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_sp.Rmd’ SUMMARY: processing the following file failed: ‘FIESTA_tutorial_GB.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Version: 3.7.0
Check: installed package size
Result: NOTE installed size is 11.5Mb sub-directories of 1Mb or more: R 5.6Mb doc 2.1Mb extdata 2.1Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64