CRAN Package Check Results for Package ICAMS

Last updated on 2025-04-28 00:50:23 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.3.12 52.49 831.63 884.12 NOTE
r-devel-linux-x86_64-debian-gcc 2.3.12 39.31 553.81 593.12 NOTE
r-devel-linux-x86_64-fedora-clang 2.3.12 1291.42 OK
r-devel-linux-x86_64-fedora-gcc 2.3.12 1087.96 OK
r-devel-windows-x86_64 2.3.12 54.00 575.00 629.00 NOTE
r-patched-linux-x86_64 2.3.12 47.80 686.77 734.57 NOTE
r-release-linux-x86_64 2.3.12 48.80 678.46 727.26 NOTE
r-release-macos-arm64 2.3.12 247.00 OK
r-release-macos-x86_64 2.3.12 356.00 OK
r-release-windows-x86_64 2.3.12 56.00 578.00 634.00 NOTE
r-oldrel-macos-arm64 2.3.12 181.00 NOTE
r-oldrel-macos-x86_64 2.3.12 286.00 NOTE
r-oldrel-windows-x86_64 2.3.12 71.00 757.00 828.00 OK

Check Details

Version: 2.3.12
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: AnnotateDBSVCF.Rd: BSgenome AnnotateSBSVCF.Rd: BSgenome GeneExpressionData.Rd: data.table ICAMS.Rd: BSgenome MutectVCFFilesToCatalog.Rd: BSgenome MutectVCFFilesToCatalogAndPlotToPdf.Rd: BSgenome MutectVCFFilesToZipFile.Rd: BSgenome NormalizeGenomeArg.Rd: BSgenome PlotTransBiasGeneExp.Rd: data.table PlotTransBiasGeneExpToPdf.Rd: data.table StrelkaSBSVCFFilesToCatalog.Rd: BSgenome StrelkaSBSVCFFilesToCatalogAndPlotToPdf.Rd: BSgenome StrelkaSBSVCFFilesToZipFile.Rd: BSgenome VCFsToCatalogs.Rd: BSgenome VCFsToCatalogsAndPlotToPdf.Rd: BSgenome VCFsToDBSCatalogs.Rd: BSgenome VCFsToSBSCatalogs.Rd: BSgenome VCFsToZipFile.Rd: BSgenome revc.Rd: reverseComplement Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 2.3.12
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Steve Rozen <steverozen@gmail.com>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Steve", family = "Rozen", role = c("aut", "cre"), email = "steverozen@gmail.com"), person(given = "Nanhai", family = "Jiang", role = "aut"), person(given = "Arnoud", family = "Boot", role = "aut"), person(given = "Mo", family = "Liu", role = "aut"), person(given = "Yang", family = "Wu", role = "aut")) as necessary. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.3.12
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'BSgenome.Hsapiens.1000genomes.hs37d5', 'BSgenome.Hsapiens.UCSC.hg38', 'BSgenome.Mmusculus.UCSC.mm10' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64