Last updated on 2024-10-20 11:51:13 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.4 | 46.37 | 156.13 | 202.50 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.0.4 | 29.80 | 108.07 | 137.87 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.0.4 | 346.91 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.0.4 | 336.49 | ERROR | |||
| r-devel-windows-x86_64 | 0.0.4 | 49.00 | 195.00 | 244.00 | NOTE | |
| r-patched-linux-x86_64 | 0.0.4 | 42.03 | 146.34 | 188.37 | OK | |
| r-release-linux-x86_64 | 0.0.4 | 40.98 | 147.32 | 188.30 | OK | |
| r-release-macos-arm64 | 0.0.4 | 92.00 | OK | |||
| r-release-macos-x86_64 | 0.0.4 | 135.00 | OK | |||
| r-release-windows-x86_64 | 0.0.4 | 46.00 | 181.00 | 227.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.4 | 101.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.0.4 | 184.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.0.4 | 55.00 | 232.00 | 287.00 | OK |
Version: 0.0.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
ODT.Rd: as.party
PPO.Rd: nnet, Pursuit
as.party.ODT.Rd: party
plot.ODT.Rd: as.party
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.0.4
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [11s/18s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(ODRF)
Loading required package: partykit
Loading required package: grid
Loading required package: libcoin
Loading required package: mvtnorm
>
> test_check("ODRF")
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: ppr.default(Xi, Yi, weights = weights, nterms = 1, bass = 1)
2: ppr(Xi, Yi, weights = weights, nterms = 1, bass = 1)
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
7: try(ppr(Xi, Yi, weights = weights, nterms = 1, bass = 1)$alpha, silent = TRUE)
8: RotMatPPO(X = X[nodeXIndx[[currentNode]], ], y = y[nodeXIndx[[currentNode]]], model = paramList$model, split = paramList$split, weights = paramList$weights, dimProj = paramList$dimProj, numProj = paramList$numProj, catLabel = paramList$catLabel)
9: ODT_compute(formula, Call, varName, X, y, split, lambda, NodeRotateFun, FunDir, paramList, MaxDepth, numNode, MinLeaf, Levels, subset, weights, na.action, catLabel, Xcat, Xscale, TreeRandRotate)
10: ODT.formula(Species ~ ., data = iris, split = "entropy", weights = weights)
11: ODT(Species ~ ., data = iris, split = "entropy", weights = weights)
12: eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
13: withVisible(code)
14: withCallingHandlers(withVisible(code), warning = handle_warning, message = handle_message)
15: force(code)
16: withr::with_output_sink(path, withCallingHandlers(withVisible(code), warning = handle_warning, message = handle_message))
17: .capture(act$val <- eval_bare(quo_get_expr(.quo), quo_get_env(.quo)), ...)
18: quasi_capture(enquo(object), NULL, evaluate_promise)
19: expect_silent(ODT(Species ~ ., data = iris, split = "entropy", weights = weights))
20: eval(code, test_env)
21: eval(code, test_env)
22: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)
23: doTryCatch(return(expr), name, parentenv, handler)
24: tryCatchOne(expr, names, parentenv, handlers[[1L]])
25: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
26: doTryCatch(return(expr), name, parentenv, handler)
27: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
28: tryCatchList(expr, classes, parentenv, handlers)
29: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
30: test_code(desc, code, env = parent.frame(), default_reporter = local_interactive_reporter())
31: test_that("holdout mode holding out data with 0 weight", { weights <- rbinom(nrow(iris), 1, 0.5) expect_silent(ODT(Species ~ ., data = iris, split = "entropy", weights = weights))})
32: eval(code, test_env)
33: eval(code, test_env)
34: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
38: doTryCatch(return(expr), name, parentenv, handler)
39: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
40: tryCatchList(expr, classes, parentenv, handlers)
41: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
42: test_code(test = NULL, code = exprs, env = env, default_reporter = StopReporter$new())
43: source_file(path, env = env(env), desc = desc, error_call = error_call)
44: FUN(X[[i]], ...)
45: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)
46: doTryCatch(return(expr), name, parentenv, handler)
47: tryCatchOne(expr, names, parentenv, handlers[[1L]])
48: tryCatchList(expr, classes, parentenv, handlers)
49: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
50: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call))
51: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call)
52: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel)
53: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
54: test_check("ODRF")
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-gcc