Last updated on 2026-10-24 15:51:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.6 | 74.07 | 549.28 | 623.35 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.6 | 46.56 | 349.50 | 396.06 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.6 | 53.00 | 348.65 | 401.65 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.6 | 53.00 | 336.95 | 389.95 | OK | |
| r-devel-windows-x86_64 | 1.6 | 76.00 | 457.00 | 533.00 | OK | |
| r-patched-linux-x86_64 | 1.6 | 71.13 | 531.31 | 602.44 | OK | |
| r-release-linux-x86_64 | 1.6 | 77.60 | 514.59 | 592.19 | OK | |
| r-release-macos-arm64 | 1.6 | 17.00 | 106.00 | 123.00 | OK | |
| r-release-macos-x86_64 | 1.6 | 53.00 | 494.00 | 547.00 | OK | |
| r-release-windows-x86_64 | 1.6 | 76.00 | 456.00 | 532.00 | OK | |
| r-oldrel-macos-arm64 | 1.6 | 17.00 | 137.00 | 154.00 | OK | |
| r-oldrel-macos-x86_64 | 1.6 | 51.00 | 490.00 | 541.00 | OK | |
| r-oldrel-windows-x86_64 | 1.6 | 104.00 | 638.00 | 742.00 | OK |
Version: 1.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [127s/167s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(R4VN)
Attaching package: 'R4VN'
The following object is masked from 'package:testthat':
describe
The following objects are masked from 'package:stats':
anova, poisson, predict
> test_check("R4VN")
Active data: d (8 observations, 3 variables) [linked]
Active data: d (8 observations, 4 variables) [linked]
Saving _problems/test-r4vn-1-4-1-upgrade-330.R
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Loading required namespace: Rcsdp
Failed with error: 'there is no package called 'Rcsdp''
Saving _problems/test-tabscore-131.R
Saving _problems/test-tabscore-291.R
[ FAIL 3 | WARN 8 | SKIP 3 | PASS 1627 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• dependency-free fallback is only used when forecast is unavailable (1):
'test-tabts-fallback.R:2:3'
• dependency-light automatic fallback is only used when forecast is unavailable
(1): 'test-tabts-fallback.R:35:3'
• empty test (1): 'test-tabmachine.R:108:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-r4vn-1-4-1-upgrade.R:330:3'): Cox models become active for margins and prediction ──
Error: Predictions could not be calculated for a margins scenario.
Backtrace:
▆
1. └─R4VN::margins(...) at test-r4vn-1-4-1-upgrade.R:330:3
2. └─R4VN:::.r4vn_margin_one(...)
── Error ('test-tabscore.R:129:3'): Cox scorecard produces time-specific risk ──
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. └─R4VN::tabscore(...) at test-tabscore.R:129:3
2. └─R4VN:::.r4vn_score_effect_dictionary(...)
3. └─R4VN:::.r4vn_score_predict_lp(fit, newdata = ref)
4. ├─base::do.call(stats::predict, args)
5. ├─stats (local) `<fn>`(object = `<coxph>`, type = "lp", reference = "zero", newdata = `<df[,2]>`)
6. └─survival:::predict.coxph(...)
7. └─stats::delete.response(Terms)
8. └─stats (local) off(a$specials[[i]])
── Error ('test-tabscore.R:288:3'): Cox riskonly reorients protective HRs to HR >= 1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. └─R4VN::tabscore(...) at test-tabscore.R:288:3
2. └─R4VN:::.r4vn_score_effect_dictionary(...)
3. └─R4VN:::.r4vn_score_predict_lp(fit, newdata = ref)
4. ├─base::do.call(stats::predict, args)
5. ├─stats (local) `<fn>`(object = `<coxph>`, type = "lp", reference = "zero", newdata = `<df[,1]>`)
6. └─survival:::predict.coxph(...)
7. └─stats::delete.response(Terms)
8. └─stats (local) off(a$specials[[i]])
[ FAIL 3 | WARN 8 | SKIP 3 | PASS 1627 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc