Last updated on 2025-03-17 12:51:33 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.5.1 | 29.83 | 274.71 | 304.54 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.5.1 | 22.29 | 178.95 | 201.24 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.5.1 | 501.11 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.5.1 | 646.56 | OK | |||
| r-devel-macos-arm64 | 1.5.1 | 149.00 | OK | |||
| r-devel-macos-x86_64 | 1.5.1 | 282.00 | OK | |||
| r-devel-windows-x86_64 | 1.5.1 | 45.00 | 290.00 | 335.00 | NOTE | |
| r-patched-linux-x86_64 | 1.5.1 | 36.90 | 263.49 | 300.39 | WARN | |
| r-release-linux-x86_64 | 1.5.1 | 33.57 | 260.93 | 294.50 | OK | |
| r-release-macos-arm64 | 1.5.1 | 153.00 | NOTE | |||
| r-release-macos-x86_64 | 1.5.1 | 234.00 | NOTE | |||
| r-release-windows-x86_64 | 1.5.1 | 44.00 | 282.00 | 326.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.5.1 | NOTE | ||||
| r-oldrel-macos-x86_64 | 1.5.1 | 397.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.5.1 | 50.00 | 365.00 | 415.00 | NOTE |
Version: 1.5.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
AdditionTree.Rd: ImposeConstraint
AllSPR.Rd: phylo
CharacterLength.Rd: phylo
ConcordantInformation.Rd: phylo
Consistency.Rd: phylo
DoubleNNI.Rd: phylo
JackLabels.Rd: phylo
Jackknife.Rd: phylo
MaximizeParsimony.Rd: phylo, ImposeConstraint
MorphyTreeLength.Rd: RenumberTips, phylo
NNI.Rd: phylo
PlotCharacter.Rd: phylo
Ratchet.Rd: phylo
RearrangeEdges.Rd: phylo
SPR.Rd: phylo
SiteConcordance.Rd: phylo
StopUnlessBifurcating.Rd: phylo
SuccessiveApproximations.Rd: phylo
TBR.Rd: phylo
TBRWarning.Rd: phylo
TaxonInfluence.Rd: ClusteringInfoDistance, write.nexus, path_sanitize
TreeSearch.Rd: phylo
cSPR.Rd: phylo
dot-NonDuplicateRoot.Rd: phylo
inapplicable.datasets.Rd: read.nexus.data
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64
Version: 1.5.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Rd warning: AdditionTree.Rd:27: missing link ‘ImposeConstraint’
Rd warning: AllSPR.Rd:11: missing link ‘phylo’
Rd warning: AllSPR.Rd:14: missing link ‘phylo’
Rd warning: AllSPR.Rd:16: missing link ‘phylo’
Rd warning: CharacterLength.Rd:16: missing link ‘phylo’
Rd warning: ConcordantInformation.Rd:16: missing link ‘phylo’
Rd warning: Consistency.Rd:13: missing link ‘phylo’
Rd warning: DoubleNNI.Rd:11: missing link ‘phylo’
Rd warning: DoubleNNI.Rd:14: missing link ‘phylo’
Rd warning: JackLabels.Rd:20: missing link ‘phylo’
Rd warning: Jackknife.Rd:23: missing link ‘phylo’
Rd warning: MaximizeParsimony.Rd:52: missing link ‘phylo’
Rd warning: MaximizeParsimony.Rd:112: missing link ‘ImposeConstraint’
Rd warning: MorphyTreeLength.Rd:26: missing link ‘RenumberTips’
Rd warning: MorphyTreeLength.Rd:33: missing link ‘phylo’
Rd warning: MorphyTreeLength.Rd:36: missing link ‘phylo’
Rd warning: NNI.Rd:27: missing link ‘phylo’
Rd warning: NNI.Rd:40: missing link ‘phylo’
Rd warning: NNI.Rd:43: missing link ‘phylo’
Rd warning: PlotCharacter.Rd:25: missing link ‘phylo’
Rd warning: Ratchet.Rd:106: missing link ‘phylo’
Rd warning: RearrangeEdges.Rd:22: missing link ‘phylo’
Rd warning: RearrangeEdges.Rd:25: missing link ‘phylo’
Rd warning: SPR.Rd:42: missing link ‘phylo’
Rd warning: SPR.Rd:49: missing link ‘phylo’
Rd warning: SPR.Rd:52: missing link ‘phylo’
Rd warning: SPR.Rd:55: missing link ‘phylo’
Rd warning: SiteConcordance.Rd:23: missing link ‘phylo’
Rd warning: StopUnlessBifurcating.Rd:11: missing link ‘phylo’
Rd warning: SuccessiveApproximations.Rd:25: missing link ‘phylo’
Rd warning: TBR.Rd:40: missing link ‘phylo’
Rd warning: TBR.Rd:54: missing link ‘phylo’
Rd warning: TBR.Rd:57: missing link ‘phylo’
Rd warning: TBRWarning.Rd:15: missing link ‘phylo’
Rd warning: TBRWarning.Rd:18: missing link ‘phylo’
Rd warning: TaxonInfluence.Rd:29: missing link ‘ClusteringInfoDistance’
Rd warning: TaxonInfluence.Rd:35: missing link ‘write.nexus’
Rd warning: TaxonInfluence.Rd:39: missing link ‘path_sanitize’
Rd warning: TreeSearch.Rd:86: missing link ‘phylo’
Rd warning: cSPR.Rd:10: missing link ‘phylo’
Rd warning: dot-NonDuplicateRoot.Rd:11: missing link ‘phylo’
Rd warning: dot-NonDuplicateRoot.Rd:14: missing link ‘phylo’
Rd warning: dot-NonDuplicateRoot.Rd:17: missing link ‘phylo’
Rd warning: inapplicable.datasets.Rd:149: missing link ‘read.nexus.data’
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/TreeSearch.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-14 (Debian 14.2.0-17) 14.2.0’
* used C++ compiler: ‘g++-14 (Debian 14.2.0-17) 14.2.0’
Flavor: r-patched-linux-x86_64
Version: 1.5.1
Check: installed package size
Result: NOTE
installed size is 5.9Mb
sub-directories of 1Mb or more:
datasets 1.6Mb
doc 1.3Mb
libs 1.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64