CRAN Package Check Results for Package adephylo

Last updated on 2025-03-16 00:49:36 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1-16 20.43 148.72 169.15 NOTE
r-devel-linux-x86_64-debian-gcc 1.1-17 13.36 111.34 124.70 OK
r-devel-linux-x86_64-fedora-clang 1.1-16 284.87 OK
r-devel-linux-x86_64-fedora-gcc 1.1-17 260.00 OK
r-devel-macos-arm64 1.1-16 84.00 OK
r-devel-macos-x86_64 1.1-16 147.00 OK
r-devel-windows-x86_64 1.1-17 23.00 184.00 207.00 OK
r-patched-linux-x86_64 1.1-16 19.98 139.48 159.46 WARN
r-release-linux-x86_64 1.1-16 18.44 137.27 155.71 OK
r-release-macos-arm64 1.1-16 78.00 OK
r-release-macos-x86_64 1.1-16 118.00 OK
r-release-windows-x86_64 1.1-16 25.00 172.00 197.00 OK
r-oldrel-macos-arm64 1.1-16 OK
r-oldrel-macos-x86_64 1.1-16 161.00 OK
r-oldrel-windows-x86_64 1.1-16 30.00 200.00 230.00 OK

Check Details

Version: 1.1-16
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: abouheif.Rd: phylo4d-class adephylo-package.Rd: phylo4d-class, phylo4-class bullseye.Rd: phylo4-class, phylo4d-class distRoot.Rd: phylo4-class, phylo4d-class distTips.Rd: phylo4-class, phylo4d-class listDD.Rd: phylo4-class, phylo4d-class listTips.Rd: phylo4-class, phylo4d-class miscUtils.Rd: phylo4-class orthobasis.Rd: phylo4-class, phylo4d-class orthogram.Rd: phylo4-class, phylo4d-class ppca.Rd: phylo4d-class, phylo4-class proxTips.Rd: phylo4-class, phylo4d-class sp.tips.Rd: phylo4-class, phylo4d-class table.phylo4d.Rd: phylo4d-class treePart.Rd: phylo4-class, phylo4d-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 1.1-16
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: abouheif.Rd:19: missing link ‘phylo4d-class’ Rd warning: abouheif.Rd:59: missing link ‘phylo4d-class’ Rd warning: adephylo-package.Rd:14: missing link ‘phylo4d-class’ Rd warning: adephylo-package.Rd:17: missing link ‘phylo4-class’ Rd warning: bullseye.Rd:29: missing link ‘phylo4-class’ Rd warning: bullseye.Rd:30: missing link ‘phylo4d-class’ Rd warning: bullseye.Rd:75: missing link ‘phylo4d-class’ Rd warning: distRoot.Rd:15: missing link ‘phylo4-class’ Rd warning: distRoot.Rd:15: missing link ‘phylo4d-class’ Rd warning: distTips.Rd:16: missing link ‘phylo4-class’ Rd warning: distTips.Rd:16: missing link ‘phylo4d-class’ Rd warning: listDD.Rd:23: missing link ‘phylo4-class’ Rd warning: listDD.Rd:23: missing link ‘phylo4d-class’ Rd warning: listDD.Rd:11: missing link ‘phylo4-class’ Rd warning: listDD.Rd:11: missing link ‘phylo4d-class’ Rd warning: listTips.Rd:19: missing link ‘phylo4-class’ Rd warning: listTips.Rd:19: missing link ‘phylo4d-class’ Rd warning: listTips.Rd:11: missing link ‘phylo4-class’ Rd warning: listTips.Rd:11: missing link ‘phylo4d-class’ Rd warning: miscUtils.Rd:26: missing link ‘phylo4-class’ Rd warning: miscUtils.Rd:10: missing link ‘phylo4-class’ Rd warning: orthobasis.Rd:19: missing link ‘phylo4-class’ Rd warning: orthobasis.Rd:19: missing link ‘phylo4d-class’ Rd warning: orthogram.Rd:27: missing link ‘phylo4-class’ Rd warning: orthogram.Rd:27: missing link ‘phylo4d-class’ Rd warning: ppca.Rd:37: missing link ‘phylo4d-class’ Rd warning: ppca.Rd:97: missing link ‘phylo4-class’ Rd warning: proxTips.Rd:21: missing link ‘phylo4-class’ Rd warning: proxTips.Rd:21: missing link ‘phylo4d-class’ Rd warning: sp.tips.Rd:37: missing link ‘phylo4-class’ Rd warning: sp.tips.Rd:38: missing link ‘phylo4d-class’ Rd warning: sp.tips.Rd:11: missing link ‘phylo4-class’ Rd warning: sp.tips.Rd:11: missing link ‘phylo4d-class’ Rd warning: table.phylo4d.Rd:100: missing link ‘phylo4d-class’ Rd warning: table.phylo4d.Rd:34: missing link ‘phylo4d-class’ Rd warning: table.phylo4d.Rd:115: missing link ‘phylo4d-class’ Rd warning: table.phylo4d.Rd:160: missing link ‘phylo4d-class’ Rd warning: treePart.Rd:11: missing link ‘phylo4-class’ Rd warning: treePart.Rd:11: missing link ‘phylo4d-class’ See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/adephylo.Rcheck/00install.out’ for details. * used C compiler: ‘gcc-14 (Debian 14.2.0-17) 14.2.0’ Flavor: r-patched-linux-x86_64