Last updated on 2025-10-16 04:50:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.87 | 254.26 | 268.13 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.13 | 242.39 | 252.52 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.32 | 269.79 | 285.11 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 184.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.041, elapsed: 2.323 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.083, system: 0.203, elapsed: 13.437 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.022, elapsed: 0.422 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.019, system: 0.325, elapsed: 7.458 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.010, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.535, system: 0.632, elapsed: 24.905 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.082, elapsed: 2.238 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.166, system: 0.225, elapsed: 14.642 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.793, system: 0.160, elapsed: 7.085 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.296 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.474, system: 0.510, elapsed: 25.539 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.029, elapsed: 2.662 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.975, system: 0.072, elapsed: 15.380 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.010, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.669, system: 0.171, elapsed: 6.084 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.251 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.133, system: 0.205, elapsed: 1.146 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.263, system: 0.511, elapsed: 26.792 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.437, system: 0.027, elapsed: 2.351 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.020, system: 0.076, elapsed: 14.389 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.185, elapsed: 6.350 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.328 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.169, system: 0.443, elapsed: 18.034 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.367, system: 0.771, elapsed: 42.769 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.046, elapsed: 2.189 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.878, system: 0.124, elapsed: 10.311 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.233 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.706, system: 0.233, elapsed: 5.554 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.011, elapsed: 0.248 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.001, system: 0.451, elapsed: 19.181 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.748, system: 0.090, elapsed: 2.696 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.129, system: 0.267, elapsed: 12.103 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.254, elapsed: 4.680 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.012, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.569, system: 0.679, elapsed: 20.676 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.062, elapsed: 2.182 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.211, system: 0.266, elapsed: 12.218 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.010, elapsed: 0.190 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.247, elapsed: 4.620 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.017, elapsed: 0.234 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.074, system: 0.254, elapsed: 0.926 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.534, system: 0.899, elapsed: 21.192 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.707, system: 0.082, elapsed: 2.102 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.296, system: 0.361, elapsed: 12.379 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.385 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.576, system: 0.171, elapsed: 9.869 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.005, elapsed: 0.429 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.084, system: 0.471, elapsed: 19.713 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.657, system: 1.136, elapsed: 46.001 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64