Last updated on 2025-11-05 09:52:30 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.64 | 232.61 | 243.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 182.00 | 195.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 16.00 | 177.00 | 193.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.653, system: 0.058, elapsed: 2.661 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.411, system: 0.098, elapsed: 11.606 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.901, system: 0.207, elapsed: 4.892 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.879, system: 0.408, elapsed: 20.410 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.045, elapsed: 1.782 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.554, system: 0.148, elapsed: 15.063 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.015, elapsed: 0.510 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.202, system: 0.265, elapsed: 7.423 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.215, system: 0.510, elapsed: 26.014 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.798, system: 0.085, elapsed: 2.640 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.918, system: 0.331, elapsed: 14.771 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.019, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.178, system: 0.311, elapsed: 6.391 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.009, elapsed: 0.252 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.298, system: 0.258, elapsed: 1.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.218, system: 1.053, elapsed: 26.596 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.835, system: 0.082, elapsed: 2.895 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.174, elapsed: 25.782 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.419 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.196, system: 0.277, elapsed: 8.213 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.009, elapsed: 0.264 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.430, system: 0.904, elapsed: 18.935 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.182, system: 1.500, elapsed: 57.687 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.943, system: 0.123, elapsed: 3.710 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.677, system: 0.213, elapsed: 17.240 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.015, elapsed: 0.272 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.825, system: 0.219, elapsed: 5.946 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.262 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.377, system: 0.612, elapsed: 28.493 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.704, system: 0.054, elapsed: 2.916 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.454, system: 0.095, elapsed: 15.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.842, system: 0.177, elapsed: 5.963 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.006, elapsed: 0.233 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.942, system: 0.387, elapsed: 25.534 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.032, elapsed: 1.820 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.475, system: 0.098, elapsed: 13.478 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.735, system: 0.179, elapsed: 4.939 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.012, elapsed: 0.286 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.117, system: 0.260, elapsed: 0.990 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.954, system: 0.621, elapsed: 22.667 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.045, elapsed: 2.091 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.240, system: 0.186, elapsed: 11.868 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.015, elapsed: 0.335 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.812, system: 0.247, elapsed: 5.894 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.006, elapsed: 0.286 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.673, system: 0.503, elapsed: 18.503 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.326, system: 1.041, elapsed: 39.899 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64