Last updated on 2025-11-30 07:49:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 265.72 | 278.30 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.67 | 214.81 | 224.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 197.00 | 208.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 194.00 | 204.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.072, elapsed: 2.335 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.551, system: 0.117, elapsed: 13.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.021, elapsed: 0.383 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.172, system: 0.329, elapsed: 7.319 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.016, elapsed: 0.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.377, system: 0.598, elapsed: 24.581 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.712, system: 0.073, elapsed: 2.241 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.638, system: 0.156, elapsed: 16.657 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.076, system: 0.189, elapsed: 6.668 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.276 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.366, system: 0.482, elapsed: 27.093 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.039, elapsed: 2.543 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.638, system: 0.105, elapsed: 14.498 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.011, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.092, system: 0.272, elapsed: 6.225 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.262 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.222, elapsed: 1.412 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.624, system: 0.704, elapsed: 26.242 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.040, elapsed: 3.677 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.506, system: 0.084, elapsed: 26.179 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.015, elapsed: 0.551 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.032, system: 0.204, elapsed: 8.429 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.005, elapsed: 0.302 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.905, system: 0.512, elapsed: 20.436 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.135, system: 0.885, elapsed: 60.980 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.708, system: 0.058, elapsed: 2.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.432, system: 0.145, elapsed: 11.798 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.020, elapsed: 0.320 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.887, system: 0.269, elapsed: 5.162 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.011, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.957, system: 0.533, elapsed: 20.754 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.767, system: 0.074, elapsed: 2.117 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.741, system: 0.255, elapsed: 12.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.018, elapsed: 0.430 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.986, system: 0.249, elapsed: 6.795 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.422, system: 0.635, elapsed: 23.146 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.783, system: 0.070, elapsed: 3.054 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.800, system: 0.220, elapsed: 15.857 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.393 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.180, elapsed: 6.677 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.381 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.160, system: 0.242, elapsed: 1.426 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.516, system: 0.776, elapsed: 29.021 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.641, system: 0.036, elapsed: 2.801 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.443, system: 0.077, elapsed: 17.847 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.469 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.824, system: 0.192, elapsed: 9.196 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.364 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.680, system: 0.499, elapsed: 23.669 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.621, system: 0.849, elapsed: 55.781 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64