Last updated on 2025-09-13 22:51:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.70 | 260.40 | 274.10 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.16 | 210.32 | 221.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 197.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 212.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/129s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.092, elapsed: 2.686 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.251, system: 0.250, elapsed: 14.443 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.020, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.941, system: 0.282, elapsed: 6.433 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.811, system: 0.685, elapsed: 24.868 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.472, system: 0.044, elapsed: 1.752 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.224, system: 0.298, elapsed: 11.154 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.019, elapsed: 0.310 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.002, system: 0.309, elapsed: 6.234 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.257 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.614, system: 0.710, elapsed: 20.471 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.734, system: 0.088, elapsed: 2.496 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.076, system: 0.184, elapsed: 14.523 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.818, system: 0.197, elapsed: 8.445 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.442 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.158, system: 0.207, elapsed: 1.979 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.751, system: 0.723, elapsed: 29.379 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.030, elapsed: 2.335 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.074, system: 0.098, elapsed: 14.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.799, system: 0.185, elapsed: 6.647 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.308 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.379, system: 0.490, elapsed: 17.897 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.726, system: 0.851, elapsed: 43.524 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.034, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.030, system: 0.091, elapsed: 15.630 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.014, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.207, elapsed: 6.734 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.051, system: 0.371, elapsed: 26.121 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.035, elapsed: 2.284 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.962, system: 0.070, elapsed: 13.803 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.688, system: 0.181, elapsed: 5.641 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.169 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.020, system: 0.329, elapsed: 23.011 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.463, system: 0.029, elapsed: 1.639 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.033, system: 0.078, elapsed: 13.898 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.534, system: 0.171, elapsed: 4.808 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.012, elapsed: 0.250 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.041, system: 0.227, elapsed: 0.895 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.047, system: 0.555, elapsed: 22.536 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.032, elapsed: 2.298 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.997, system: 0.070, elapsed: 20.474 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.382 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.549, system: 0.174, elapsed: 6.638 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.305 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.124, system: 0.467, elapsed: 19.619 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.144, system: 0.788, elapsed: 50.841 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64