CRAN Package Check Results for Package multilevelcoda

Last updated on 2025-12-20 15:50:54 CET.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.3.3	37.88	274.07	311.95	ERROR
r-devel-linux-x86_64-debian-gcc	1.3.3	23.92	198.18	222.10	ERROR
r-devel-linux-x86_64-fedora-clang	1.3.3	65.00	432.99	497.99	ERROR
r-devel-linux-x86_64-fedora-gcc	1.3.3	65.00	412.24	477.24	ERROR
r-devel-windows-x86_64	1.3.3	36.00	253.00	289.00	OK
r-patched-linux-x86_64	1.3.3	38.01	266.22	304.23	OK
r-release-linux-x86_64	1.3.3	36.16	263.68	299.84	OK
r-release-macos-arm64	1.3.3				OK
r-release-macos-x86_64	1.3.3	20.00	244.00	264.00	OK
r-release-windows-x86_64	1.3.3	33.00	251.00	284.00	OK
r-oldrel-macos-arm64	1.3.3				NOTE
r-oldrel-macos-x86_64	1.3.3	21.00	279.00	300.00	NOTE
r-oldrel-windows-x86_64	1.3.3	48.00	316.00	364.00	NOTE

Check Details

Version: 1.3.3
Check: examples
Result: ERROR Running examples in ‘multilevelcoda-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: complr > ### Title: Indices from a (dataset of) Multilevel Composition(s) > ### Aliases: complr > > ### ** Examples > > x1 <- complr(data = mcompd, + parts = c("TST", "WAKE", "MVPA", "LPA", "SB"), + idvar = "ID", total = 1440) A sequential binary partition (sbp), is required for ilr transform but is not supplied. A default sbp, which is a pivot balance, will be applied. Error in `[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), : attempt access index 10/10 in VECTOR_ELT Calls: complr -> [ -> [.data.table Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.3.3
Check: tests
Result: ERROR Running ‘testthat.R’ [37s/27s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(data.table) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > library(multilevelcoda) Attaching package: 'multilevelcoda' The following object is masked from 'package:base': sub > library(extraoperators) > library(brms) Loading required package: Rcpp Loading 'brms' package (version 2.23.0). Useful instructions can be found by typing help('brms'). A more detailed introduction to the package is available through vignette('brms_overview'). Attaching package: 'brms' The following object is masked from 'package:stats': ar > > test_check("multilevelcoda") Starting 2 test processes. > test-complr.R: > test-complr.R: Attaching package: 'data.table' > test-complr.R: > test-complr.R: The following object is masked from 'package:base': > test-complr.R: > test-complr.R: %notin% > test-complr.R: > test-complr.R: Loading required package: Rcpp > test-complr.R: Loading 'brms' package (version 2.23.0). Useful instructions > test-complr.R: can be found by typing help('brms'). A more detailed introduction > test-complr.R: t > test-complr.R: o the package is available through vignette('brms_overview'). > test-complr.R: > test-complr.R: Attaching package: 'brms' > test-complr.R: > test-complr.R: The following object is masked from 'package:stats': > test-complr.R: > test-complr.R: ar > test-complr.R: > test-complr.R: Loading required package: Matrix > test-complr.R: > test-complr.R: Attaching package: 'lme4' > test-complr.R: > test-complr.R: The following object is masked from 'package:brms': > test-complr.R: > test-complr.R: ngrps > test-complr.R: Saving _problems/test-complr-17.R [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-brmcoda.R:1:1', 'test-plotcoda.R:1:1', 'test-substitution.R:1:1', 'test-update.R:1:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-complr.R:16:1'): (code run outside of `test_that()`) ─────────── Error in ``[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar))`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelcoda::complr(...) at test-complr.R:16:1 2. ├─tmp[, `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar)] 3. └─data.table:::`[.data.table`(...) [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.3.3
Check: tests
Result: ERROR Running ‘testthat.R’ [26s/19s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(data.table) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > library(multilevelcoda) Attaching package: 'multilevelcoda' The following object is masked from 'package:base': sub > library(extraoperators) > library(brms) Loading required package: Rcpp Loading 'brms' package (version 2.23.0). Useful instructions can be found by typing help('brms'). A more detailed introduction to the package is available through vignette('brms_overview'). Attaching package: 'brms' The following object is masked from 'package:stats': ar > > test_check("multilevelcoda") Starting 2 test processes. > test-complr.R: > test-complr.R: Attaching package: 'data.table' > test-complr.R: > test-complr.R: The following object is masked from 'package:base': > test-complr.R: > test-complr.R: %notin% > test-complr.R: > test-complr.R: Loading required package: Rcpp > test-complr.R: Loading 'brms' package (version 2.23.0). Useful instructions > test-complr.R: can be found by typing help('brms'). A more detailed introduction > test-complr.R: to the package is available through vignette('brms_overview'). > test-complr.R: > test-complr.R: Attaching package: 'brms' > test-complr.R: > test-complr.R: The following object is masked from 'package:stats': > test-complr.R: > test-complr.R: ar > test-complr.R: > test-complr.R: Loading required package: Matrix > test-complr.R: > test-complr.R: Attaching package: 'lme4' > test-complr.R: > test-complr.R: The following object is masked from 'package:brms': > test-complr.R: > test-complr.R: ngrps > test-complr.R: Saving _problems/test-complr-17.R [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-brmcoda.R:1:1', 'test-plotcoda.R:1:1', 'test-substitution.R:1:1', 'test-update.R:1:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-complr.R:16:1'): (code run outside of `test_that()`) ─────────── Error in ``[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar))`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelcoda::complr(...) at test-complr.R:16:1 2. ├─tmp[, `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar)] 3. └─data.table:::`[.data.table`(...) [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.3
Check: examples
Result: ERROR Running examples in ‘multilevelcoda-Ex.R’ failed The error most likely occurred in: > ### Name: complr > ### Title: Indices from a (dataset of) Multilevel Composition(s) > ### Aliases: complr > > ### ** Examples > > x1 <- complr(data = mcompd, + parts = c("TST", "WAKE", "MVPA", "LPA", "SB"), + idvar = "ID", total = 1440) A sequential binary partition (sbp), is required for ilr transform but is not supplied. A default sbp, which is a pivot balance, will be applied. Error in `[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), : attempt access index 10/10 in VECTOR_ELT Calls: complr -> [ -> [.data.table Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3.3
Check: tests
Result: ERROR Running ‘testthat.R’ [58s/69s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(data.table) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > library(multilevelcoda) Attaching package: 'multilevelcoda' The following object is masked from 'package:base': sub > library(extraoperators) > library(brms) Loading required package: Rcpp Loading 'brms' package (version 2.23.0). Useful instructions can be found by typing help('brms'). A more detailed introduction to the package is available through vignette('brms_overview'). Attaching package: 'brms' The following object is masked from 'package:stats': ar > > test_check("multilevelcoda") Starting 2 test processes. > test-complr.R: > test-complr.R: Attaching package: 'data.table' > test-complr.R: > test-complr.R: The following object is masked from 'package:base': > test-complr.R: > test-complr.R: %notin% > test-complr.R: > test-complr.R: Loading required package: Rcpp > test-complr.R: Loading 'brms' package (version 2.23.0). Useful instructions > test-complr.R: can be found by typing help('brms'). A more detailed introduction > test-complr.R: to the package is available through vignette('brms_overview'). > test-complr.R: > test-complr.R: Attaching package: 'brms' > test-complr.R: > test-complr.R: The following object is masked from 'package:stats': > test-complr.R: > test-complr.R: ar > test-complr.R: > test-complr.R: Loading required package: Matrix > test-complr.R: > test-complr.R: Attaching package: 'lme4' > test-complr.R: > test-complr.R: The following object is masked from 'package:brms': > test-complr.R: > test-complr.R: ngrps > test-complr.R: Saving _problems/test-complr-17.R [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-brmcoda.R:1:1', 'test-plotcoda.R:1:1', 'test-substitution.R:1:1', 'test-update.R:1:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-complr.R:16:1'): (code run outside of `test_that()`) ─────────── Error in ``[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar))`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelcoda::complr(...) at test-complr.R:16:1 2. ├─tmp[, `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar)] 3. └─data.table:::`[.data.table`(...) [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.3.3
Check: tests
Result: ERROR Running ‘testthat.R’ [43s/59s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(data.table) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > library(multilevelcoda) Attaching package: 'multilevelcoda' The following object is masked from 'package:base': sub > library(extraoperators) > library(brms) Loading required package: Rcpp Loading 'brms' package (version 2.23.0). Useful instructions can be found by typing help('brms'). A more detailed introduction to the package is available through vignette('brms_overview'). Attaching package: 'brms' The following object is masked from 'package:stats': ar > > test_check("multilevelcoda") Starting 2 test processes. > test-complr.R: > test-complr.R: Attaching package: 'data.table' > test-complr.R: > test-complr.R: The following object is masked from 'package:base': > test-complr.R: > test-complr.R: %notin% > test-complr.R: > test-complr.R: Loading required package: Rcpp > test-complr.R: Loading 'brms' package (version 2.23.0). Useful instructions > test-complr.R: can be found by typing help('brms'). A more detailed introduction > test-complr.R: to the package is available through vignette('brms_overview'). > test-complr.R: > test-complr.R: Attaching package: 'brms' > test-complr.R: > test-complr.R: The following object is masked from 'package:stats': > test-complr.R: > test-complr.R: ar > test-complr.R: > test-complr.R: Loading required package: Matrix > test-complr.R: > test-complr.R: Attaching package: 'lme4' > test-complr.R: > test-complr.R: The following object is masked from 'package:brms': > test-complr.R: > test-complr.R: ngrps > test-complr.R: Saving _problems/test-complr-17.R [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-brmcoda.R:1:1', 'test-plotcoda.R:1:1', 'test-substitution.R:1:1', 'test-update.R:1:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-complr.R:16:1'): (code run outside of `test_that()`) ─────────── Error in ``[.data.table`(tmp, , `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar))`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelcoda::complr(...) at test-complr.R:16:1 2. ├─tmp[, `:=`(paste0("b", v), mean(get(v), na.rm = TRUE)), by = eval(idvar)] 3. └─data.table:::`[.data.table`(...) [ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.3.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘cmdstanr’ Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.3.3
Check: installed package size
Result: NOTE installed size is 8.1Mb sub-directories of 1Mb or more: doc 6.4Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64