Bug fixes
- Fixed
plot_er_exp_sel() (and plot() for
ermod_exp_sel objects) failing with loo (>=
2.10.0), which returns loo_compare() output as a data frame
with model names in a model column rather than in the
matrix row names.
Major changes
- Replaced
tidybayes dependency with ggdist
and rstantools to avoid CRAN archival risk from
tidybayes’s dependency on arrayhelpers.
tidybayes::add_*_draws() calls replaced with direct
posterior_epred() / posterior_linpred() /
posterior_predict() via rstantools generics.
tidybayes::median_qi() replaced with
ggdist::median_qi().
Major changes
- Updated compatibility with upcoming changes to
loo_compare() output structure in the loo
package (> 2.9.0), which now returns a data frame instead of a matrix
and includes additional diagnostic columns.
Minor changes
- Allow manual breaks in
plot_er() to control the
position of the probability summary breaks for binary models
- Added
return_components option to
plot_er() and plot_er_gof() that returns
individual plot components (main plot, boxplot, caption) for
customization before recombining with
combine_er_components()
Major changes
- Extended covariate effects functionality to support linear
regression models (
ermod_lin) in addition to binary
logistic regression models (ermod_bin)
Minor changes
- Fix test for rstanarm update
Major changes
Minor changes
- Prepare for the upcoming ggplot2 release
Major changes
- Implemented
kfold() function to allow the estimation of
ELPD to work with loo ecosystem
- Added simulated dataset for Emax model
https://github.com/Genentech/BayesERtools/pull/7 (1)
Minor changes
- Enable setting the prior distribution for linear models
- Added
exp_candidates argument to
extract_coef_exp_ci() function to allow for the extraction
of coefficients from all candidate models
- Update package dependencies
- Update package dependency