Pham TV, Tran CT, Henneman AA, Pham LH, Le DG, Can AH, Bui PH, Piersma SR, Jimenez CR (2026). “Boosting the speed and accuracy of protein quantification algorithms in mass spectrometry-based proteomics.” Journal of Proteome Research, 25(2), 1198-1203. https://doi.org/10.1021/acs.jproteome.5c01038.

Pham TV, Henneman AA, Jimenez CR (2020). “iq: an R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics.” Bioinformatics, 36(8), 2611-2613. https://doi.org/10.1093/bioinformatics/btz961.

Corresponding BibTeX entries:

  @Article{,
    title = {Boosting the speed and accuracy of protein quantification
      algorithms in mass spectrometry-based proteomics},
    author = {Thang V. Pham and Chau T. M. Tran and Alex A. Henneman
      and Long H. C. Pham and Duc G. Le and An H. Can and Phuc H. L.
      Bui and Sander R. Piersma and Connie R. Jimenez},
    journal = {Journal of Proteome Research},
    volume = {25},
    number = {2},
    pages = {1198-1203},
    year = {2026},
    url = {https://doi.org/10.1021/acs.jproteome.5c01038},
  }

  @Article{,
    title = {{iq}: an R package to estimate relative protein abundances
      from ion quantification in DIA-MS-based proteomics},
    author = {Thang V. Pham and Alex A. Henneman and Connie R.
      Jimenez},
    journal = {Bioinformatics},
    volume = {36},
    number = {8},
    pages = {2611-2613},
    year = {2020},
    url = {https://doi.org/10.1093/bioinformatics/btz961},
  }