seam: Sparse Extended Analysis of Modules

Provides tools for comparing groups using sparse principal component analysis (SPCA). Includes functions for identifying and visualizing influential variables, assessing variable selection stability through bootstrapping, and exploring associations with clinical traits. SPCA is implemented using the method described in <doi:10.1198/106186006X113430>.

Version: 0.1.0
Depends: R (≥ 4.1.0)
Imports: dplyr, elasticnet, ggplot2, graphics, rlang, stats, tidyr
Suggests: spelling, testthat (≥ 3.0.0)
Published: 2026-11-07
DOI: 10.32614/CRAN.package.seam (may not be active yet)
Author: Marketa Barac Makarova [aut, cre], Jan Kolacek [ctb]
Maintainer: Marketa Barac Makarova <marketa.makarova at mail.muni.cz>
BugReports: https://github.com/marketa-makarova/seam/issues
License: MIT + file LICENSE
URL: https://github.com/marketa-makarova/seam
NeedsCompilation: no
Language: en-US
Materials: README
CRAN checks: seam results

Documentation:

Reference manual: seam.html , seam.pdf

Downloads:

Package source: seam_0.1.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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