An implementation of sensitivity analysis for phylogenetic comparative
methods. The package is an umbrella of statistical and graphical methods that
estimate and report different types of uncertainty in PCM:
(i) Species Sampling uncertainty (sample size; influential species and clades).
(ii) Phylogenetic uncertainty (different topologies and/or branch lengths).
(iii) Data uncertainty (intraspecific variation and measurement error).
| Version: |
0.8.5 |
| Depends: |
R (≥ 3.4.0), ape (≥ 3.3), phylolm (≥ 2.4), ggplot2 (≥
2.1.0) |
| Imports: |
caper (≥ 0.5.2), phytools (≥ 0.6), geiger (≥ 2.0) |
| Suggests: |
knitr, rmarkdown |
| Published: |
2020-04-02 |
| DOI: |
10.32614/CRAN.package.sensiPhy |
| Author: |
Gustavo Paterno [cre, aut],
Gijsbert Werner [aut],
Caterina Penone [aut],
Pablo Martinez [ctb] |
| Maintainer: |
Gustavo Paterno <paternogbc at gmail.com> |
| BugReports: |
https://github.com/paternogbc/sensiPhy/issues |
| License: |
GPL-2 |
| URL: |
https://github.com/paternogbc/sensiPhy |
| NeedsCompilation: |
no |
| Citation: |
sensiPhy citation info |
| Materials: |
NEWS |
| CRAN checks: |
sensiPhy results [issues need fixing before 2026-08-31] |